Candidatus Kuenenia stuttgartensis: KSMBR1_1993
Help
Entry
KSMBR1_1993 CDS
T05435
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
kst
Candidatus Kuenenia stuttgartensis
Pathway
kst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSMBR1_1993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kst03021
]
KSMBR1_1993
03019 Messenger RNA biogenesis [BR:
kst03019
]
KSMBR1_1993
Transcription machinery [BR:
kst03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KSMBR1_1993
Messenger RNA biogenesis [BR:
kst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KSMBR1_1993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
AAA
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
SOH04491
UniProt:
A0A2C9CFM5
LinkDB
All DBs
Position
MBR1:complement(2173041..2174378)
Genome browser
AA seq
445 aa
AA seq
DB search
MVLDSKKEIEVIDKETNEKYEEIKRGKMHITELQKKTIKELQDIAKKEGLKEYTGLKKQE
LIFKILKERVNQNGLMYGEGVVEVLPEGFGFLRSPDYNYLPCPDDIYISPSQIRRFGIRT
GAVVSGQIRPPKDSERYFALLRVEAINFENPEMMGDKIVFDDLTPLHPTERLFLEKDPAE
LETRIMDFVTPIGKGQRGLIVAPPRTGKTVLLQKVANSITKNHPEAYLIILLIDERPEEV
TDMDRSVDAEVIGSTFDEPASRHIQVAEMVIEKAKRMVEYGKDVVVLLDSITRLARAYNT
EIPHSGKILSGGVDASALQKPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFK
GTGNMELHLDRKLADRRLFPAIDITRSGTRKEELIVNADEIKRIWILRKVLNEMNPIEAM
ELLKNRLSKTKTNAEFLMTMNISGL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggacagtaaaaaagaaatagaagtaatagataaagaaacaaatgaaaaatat
gaggaaatcaaacgcggcaaaatgcacataacagaactgcaaaagaaaacaatcaaggaa
ttacaggatatcgccaagaaggaagggcttaaagaatacacgggattaaagaagcaggaa
ctgatctttaaaatcctgaaggaaagagtcaatcaaaatggtctgatgtacggagaaggc
gtagtggaggtgcttccggagggttttggttttctccgttcacctgactataattacctg
ccttgcccggacgacatctacatttcgccttcgcaaatacgccgttttggcattcgtacc
ggcgctgttgtatcagggcaaataaggccaccaaaggattcagaacggtattttgcattg
ttgcgtgttgaggcaataaattttgaaaatccggaaatgatgggagataagattgttttt
gatgacctgactccccttcacccaactgaaaggctttttttagaaaaagatcctgctgaa
cttgagacaagaattatggattttgttacgcctatcggcaaaggccagaggggtttaatc
gtagcgcctccacgcacggggaaaacagtgttgcttcaaaaagtagcaaatagtattaca
aaaaaccatcccgaagcgtatttgattatcctgctcatcgatgaaaggccggaagaagtt
acggatatggacaggtcggttgatgcggaggttataggatctaccttcgatgagccggca
agcaggcatattcaggttgcggaaatggtaatagaaaaggcaaaacgcatggtggaatat
ggcaaagacgttgttgtgctgctcgattccatcacaagactggcaagggcatacaacaca
gagattccccacagtggcaaaatactgtccggcggtgtggatgcaagtgcccttcagaaa
cctaaaaggtttttcggggctgcaagaaacattgaagaaggcggcagccttaccatcatt
gcaaccgcacttgttgatacgggaagcaggatggatgaggttatttttgaagagttcaag
ggcactggcaatatggagcttcatcttgacaggaagctggcagaccgcagactgtttccc
gcaattgatattacccgttcaggtacccgcaaagaagagttaattgttaatgcagacgaa
attaaacgcatctggatactcagaaaggtgcttaacgaaatgaatcctatagaagctatg
gaattattaaagaacaggctttcaaaaacaaaaacaaatgccgaatttctgatgacgatg
aatattagcggactctaa
DBGET
integrated database retrieval system
