Candidatus Kuenenia stuttgartensis: KSMBR1_3342
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Entry
KSMBR1_3342 CDS
T05435
Symbol
rpoD_2
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
kst
Candidatus Kuenenia stuttgartensis
Pathway
kst02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KSMBR1_3342 (rpoD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kst03021
]
KSMBR1_3342 (rpoD_2)
Transcription machinery [BR:
kst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSMBR1_3342 (rpoD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HemX
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
SOH05818
UniProt:
A0A2C9CJN8
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All DBs
Position
MBR1:complement(3606481..3607956)
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AA seq
491 aa
AA seq
DB search
MTILKQKTERLDQINNENNPVEEEITEWNQEEEKSRDYDSVRLYLNEMAKIPLLTPAEEI
YLAKKIRVMSRLLHRKVLGFDYALEMYIRLLEGVESESELVQFVELSAAREQNRDAVVEQ
IHAVTSNIRKSIESNLKDYEKIRRGNIARDKKLRVHKSILVRKGMAIKELESISVRSETI
LPVMRELLEVLSTIADYNRKRTVHRNFKRELCKELSCDINEIEALFAMPAKELKKIIFSI
NSIYNEYVMARKRFSEGNLRLVVSIAKKYRKRGMAFHDLIQEGNTGLMRAVDKYDYRMGF
KFSTYATWWIKQAIIRATEEKVRTIRIPVHMMDVINKSTYVAKAGQGSSAEKIQLEAIAR
DTNTPLPEIYRLLQITSQPISLETPIGSDGETMFEDFIQDKKIDAPIFLAQRSLLKEQIQ
KVLDTLSYREREIIKLRFGISDGYTHSLEEIGKRFNITRERIRQIEAIALRKLQHPVRSR
KLEGFLEGTMN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccatattaaaacaaaaaacagaacggttagatcaaataaacaacgaaaataacccg
gttgaggaagagataacagaatggaaccaggaagaagaaaagagccgcgattatgattct
gtacgattatatttaaatgagatggcaaaaataccactgcttacccctgcagaagaaatc
taccttgcgaagaagatacgggttatgagcagactgctccatcgcaaggtgctgggtttt
gattatgccttggaaatgtatatacgactactggaaggagtggagagtgaatcagagctt
gttcaatttgttgaattatcagcggcaagagaacaaaaccgggatgcagttgttgaacag
attcacgcggttaccagcaatatcagaaagagcatagaaagcaatttaaaagattatgaa
aagattcgcaggggaaatattgcgcgggataaaaagctgagggtgcataaaagtattctc
gtaagaaagggaatggcgattaaagagttagaatccattagtgtacggtcggaaaccata
ctgccggttatgcgtgaattgttagaggttttatcgacaattgcggattataatagaaaa
cgtaccgtccatcgtaattttaaaagggaattatgcaaagaactttcttgtgatatcaat
gagatagaggcattgtttgcaatgccggcgaaagagttgaaaaaaattattttttctatt
aattccatttacaatgaatatgtgatggcaagaaagcggttttcagagggaaatttacga
ctggtagtaagtatcgcaaaaaaatatagaaaacgagggatggcttttcacgaccttatc
caggaaggtaatacggggcttatgcgcgccgtggacaaatatgactacaggatgggtttt
aaattcagcacatatgcaacatggtggataaaacaagctattatcagggcaacagaagaa
aaagtaagaacaatacgaatccctgtgcatatgatggatgtaatcaataagtctacttac
gtggccaaagctggacagggatcatctgcggaaaaaatacagttagaagccattgcaagg
gataccaatacgccattgcctgaaatatatagattgcttcagataacatcacaacctata
tcattagaaacaccaattggcagtgatggagaaacaatgtttgaagattttattcaggac
aaaaaaatagacgcccctatatttcttgcccagcgttctttattaaaagaacaaatacaa
aaggtgcttgatacgttaagttaccgcgaacgggagattattaaattacgttttggaatt
agtgatggatacacacactcattggaagaaatcggaaagaggttcaatataacccgcgaa
cgtatccggcagattgaagctattgcccttcgtaaacttcaacatccggttcgcagtaga
aaactggaaggatttcttgaaggtacgatgaattaa
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