Komagataeibacter sucrofermentans: ACM0P6_05100
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Entry
ACM0P6_05100 CDS
T11177
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ksu Komagataeibacter sucrofermentans
Pathway
ksu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P6_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksu03019
]
ACM0P6_05100
Enzymes [BR:
ksu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACM0P6_05100
Messenger RNA biogenesis [BR:
ksu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACM0P6_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CHASE8
AAA_22
YbbR
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XOO51388
LinkDB
All DBs
Position
complement(1049891..1051228)
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AA seq
445 aa
AA seq
DB search
MTTTFADLHLAEPLLRALDEEGYATPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALP
ILDRLFREKGRAHPKGARALVLAPTRELASQIGESFASYARHMRFSHAVVFGGVGQGRQI
EALRRGVDVLVAAPGRLLDLMGQGHVDLSGLEVLVLDEADRMLDMGFVRDIRKIVAALPT
DRQTLLFSATMPKTISDLAHGLLRDPATVQVTPPSSTVDRIRQAVMFVDTGNKREALKLL
VDSPKVERAVVFTLMKHEANKVATFLNEHGITAEAIHGNKSQGARERAMSGFRSGNVKVL
VATDIAARGIDVDDVTHVFNYDLPNVPESYVHRIGRTARAGREGWAVSLCDAEQRAWLRD
IEKNIGKKIPVVSEHPYHSETAENSTMRPPVLGGGGRGRGGGGGRPGGGRPGGGGRPAGG
GRPPAGGRGGRPGGNRSGGGGRRAV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacgtttgccgatcttcatcttgcagagcccctgctgcgggcactggacgag
gaaggctacgccacgcccacccccatccaggccggcgccattccctacctgctggaaggg
cgcgacctgctgggtctggcccagaccggcacgggcaagaccgcggccttcgcgctgccc
atccttgaccgtcttttccgcgagaagggccgtgcccaccccaagggcgcgcgcgccctg
gtgctggcccccacgcgcgagctggcctcccagatcggggaaagctttgcatcctatgcc
cgccacatgcgcttcagccacgctgtcgtgttcggtggcgtggggcagggccgccagatc
gaggcgctgcgtcgtggcgtggacgtgctcgtggccgcccccggccgcctgcttgacctg
atgggtcagggccatgtcgatctgtccggccttgaagtgctggtgcttgatgaagccgac
cgcatgctcgacatgggcttcgtgcgcgatatccgcaagattgtcgcagccctgcccacc
gaccgccagaccctgctgttctcggccaccatgcccaagaccatatcggacctggcgcac
ggcctgctgcgcgacccggccacggtgcaggtcaccccgccgtccagcacggtggaccgc
atccgtcaggccgtgatgtttgtcgataccggcaacaagcgcgaggcgctgaagctgctg
gtggactcgcccaaggtcgagcgcgccgtggtgttcacgctgatgaagcatgaggccaac
aaggtcgcgaccttcctcaacgagcacggcatcaccgccgaggccattcacggcaacaag
tcgcagggtgcgcgtgagcgcgccatgtcaggcttccgttcgggcaatgtgaaggtgctg
gtggcgaccgatatcgcggcccgcggcattgacgtggatgacgtgacccacgtgttcaac
tacgacctgcccaacgtgcccgagagctatgtgcaccgcatcgggcgtacggcgcgcgcg
gggcgtgaaggctgggcggtctcgctgtgcgatgccgagcagcgcgcctggctgcgtgat
attgaaaagaatatcggcaagaagatccccgtggtgtccgagcatccgtaccattcggaa
accgccgagaactcgaccatgcgcccgcccgtgctcggtggcggcggtcgtggtcgtggc
ggcggcggtggccgccccggtggtggtcgccccggtggcggcggtcgtcctgccggtggc
ggtcgcccgcccgccggtggccggggtggtcgccccggtggcaaccgctccggtggcggt
ggccgccgcgcagtctga
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