Komagataeibacter sucrofermentans: ACM0P6_05125
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Entry
ACM0P6_05125 CDS
T11177
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ksu Komagataeibacter sucrofermentans
Pathway
ksu03030
DNA replication
ksu03430
Mismatch repair
ksu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ksu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACM0P6_05125 (dnaE)
03430 Mismatch repair
ACM0P6_05125 (dnaE)
03440 Homologous recombination
ACM0P6_05125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ksu03032
]
ACM0P6_05125 (dnaE)
03400 DNA repair and recombination proteins [BR:
ksu03400
]
ACM0P6_05125 (dnaE)
Enzymes [BR:
ksu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACM0P6_05125 (dnaE)
DNA replication proteins [BR:
ksu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACM0P6_05125 (dnaE)
DNA repair and recombination proteins [BR:
ksu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACM0P6_05125 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PucR
HROB
Motif
Other DBs
NCBI-ProteinID:
XOO51393
LinkDB
All DBs
Position
complement(1054614..1058048)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSHADFVHLRVHSAYSLSQGAIRVPELVALAHDMRMPAVAITDTGNMFGALEFSQYCGKK
GVQPIIGCQLALPSRSDKPGMPAEPLVLLARNPEGLANLQFLSSAGFLQHETDEPTVTLD
QLCERAGGLFLLTGGSRGPLFHMLAEGQEKEAARFMDRLQEAYGSHMAVELHRHGQAAER
AVEPGMIAMADRMGLPLVATNECFFPRPDMYEAHDALLCIAQGRTMAERERWRVTPEHWF
KPPEVMRELFADLPEACDNTLEIARCCAVQVETRKPLLPMCPKVQPGKTEDETLRNMAIT
GLKNRLSRMSVDDDTRTKYEERLAFELDIIAQMGFPGYFMIVADFIQWAKAHDIPVGPGR
GSGAGSLAAWALTITDIDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVISYVRTEY
GPDRVAQIITFGKLQARAAVRDVGRVLGLPFGMVNRVAELIPNNPAQPVTLKQAIEGEPR
LQEMRDEDEAIRRLLEIGQQLEGLFRHASTHAAGVVIGDRELVELVPLYRDPKSEMLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILQRAVQFLHGMGIEVDLSALPLDDELTYDMLARGDT
AGVFQFEGAGMRDVLKQMRPTRLEDLIAAVALYRPGPMANIPDYCRRKHGEAWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRAEMDRQREIFTEGAMK
RGIERDKAAEVFDLMAKFADYGFNKSHAAAYALVSYQTAWMKANHPVAFIAACMSLAREK
TDKLAGLRQEADRLGIPLLPPDINASGADFTVEKLPDGETYGIRYALAAIKKVGLGAMQS
LVAVRGNRPFTDLEDLAARLDPRQVNKMQLENLARAGAFDTILPNRAQACGAAETVMRRA
QANAQEAASGQIGLFGGGSGAPAQREPLRMPRCADWPEFERLNMEADAIGFHLTGHPLDS
YGPLMRRLGAIRATGLEAAAQAGIGRVKIAGCVVDRKERPTRTGNKMAWVRLSDASGGCE
VTFFSEVLSRAREILVAGNAVVVTADLKLEGEALRITASDVMELEQAAAEAAAELRIWFD
QAEAIEPIRDVLLGHGSGRGRVILMPSLAATQDVELTLAERYRVTPRVAQMIKAIEGVGK
VEQF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgccgattttgtccatctgcgcgtccactccgcctattccctgagccagggg
gccatccgcgtgcctgaactggtggcgctggcgcatgacatgcgcatgcccgccgttgcc
ataaccgatacgggcaacatgtttggcgcgctcgaattttcacagtattgcggcaagaaa
ggcgtgcagcccatcatcggctgccagctcgcactcccgtcgcgtagcgacaagcccggc
atgcccgccgagccactggtgctgctggcccgcaacccggaggggctggccaacctgcag
ttcctgtcctcggccgggttcttgcagcacgaaacggatgagccaaccgtaacactcgac
cagctatgcgaacgcgcgggcgggctgttcctgcttaccggcggcagtcgtggcccgctg
tttcacatgttggccgaagggcaggagaaagaggccgcccgtttcatggaccgcctgcag
gaggcctatggcagccacatggcggtcgaactgcaccgccacgggcaggcggccgagcgc
gcggtggagccgggcatgatcgccatggccgaccgcatgggcctgccgctggtcgccacc
aatgagtgtttcttcccccggccagacatgtacgaggcgcatgacgcactgctgtgcatt
gcccagggccgcaccatggccgagcgtgagcgctggcgcgttacccccgagcactggttc
aagccgccggaggtgatgcgcgaactctttgccgacctgcccgaagcctgcgacaacacg
ctcgagatcgcgcgctgctgcgcagtgcaggtggaaacgcgcaagccgcttctgcccatg
tgccccaaggtgcagcccggcaagaccgaggatgaaaccctgcgcaacatggccatcacc
ggcctgaaaaaccgcctgtcgcgcatgagcgtggatgacgacacgcgcacgaaatacgag
gaacgtctggcgttcgagctcgatattatcgcgcagatgggatttcccggctacttcatg
atcgtggccgacttcatccagtgggccaaggcgcatgacatccccgtggggccggggcgt
ggttcgggggcaggctcgctcgcggcgtgggcgctgaccattaccgatattgaccccatt
cccttcaacctgctgttcgagcgcttcctcaatcccgagcgcgtgtcgatgccggatttt
gacatcgatttctgtcaggaccggcgcgatgaggtcatcagctacgtccgcaccgaatac
ggcccggaccgcgtggcccagatcatcacattcggtaagctgcaggcgcgtgccgccgtg
cgtgacgtggggcgcgtgcttggcctgccgtttggcatggtcaaccgcgtggccgaactc
atccccaacaaccccgcccagccggtaacactgaagcaggcgatcgagggcgagccgcgc
ctgcaggaaatgcgcgacgaggacgaggccatccgccgcctgctggaaattggccagcag
cttgaaggcctgttccgccacgccagcacgcatgccgcaggcgttgtgattggtgaccgc
gagcttgtggaactggtgccgctttatcgcgaccccaagagcgagatgctggtcacgcag
tataacatgaagttcgtggagcaggcggggctggtcaaattcgacttccttggcctgacc
acgctcaccatcttgcaacgcgcggtgcagttcctgcatggcatgggcatcgaggtcgat
ctgtccgccctgccgctggatgacgaactgacttacgacatgctggcgcgcggcgatacg
gcgggcgtgttccagtttgaaggcgctggcatgcgcgacgtgctcaagcagatgcgcccg
acccggctcgaagacctgatcgccgccgtggccctgtatcgtcccggcccgatggccaac
atccccgattactgcaggcgcaagcacggcgaggcgtgggagccgccgcacgaggaaatc
cgcgacattcttgaagagacctacggcatcatggtctatcaggaacaggtcatgcagatt
gcccagaagatggcgggctacagccttggcggggccgacctgctgcgccgcgccatgggt
aagaagatccgcgccgagatggaccgccagcgcgagatctttaccgaaggggcgatgaaa
cgcggcatcgagcgcgacaaggccgccgaggtgttcgacctcatggccaagtttgccgat
tatggctttaacaaatcacatgccgcagcctacgcgctcgtgtcgtaccagaccgcgtgg
atgaaggcgaaccaccccgtggcctttattgccgcgtgcatgtcgctggcgcgggaaaag
accgacaagctggccggcctgcggcaggaagccgaccggctgggcattccgctgctgcca
cccgacatcaacgcatcgggcgccgactttacggtggaaaaactgcccgatggcgagacc
tacggcatccgctacgcgctggcggcgataaaaaaggtagggctgggggccatgcagtcg
ctcgtggcggtgcgcggcaacagaccctttaccgaccttgaggatctcgccgcccgcctt
gaccccagacaggtcaacaagatgcagcttgaaaacctggcccgcgcgggtgcgttcgac
accatcctgcccaatcgcgcgcaggcctgcggggcggccgaaaccgtcatgcgccgcgcg
caggctaacgctcaggaggcggcgagcgggcagatcggcctgtttggtggcggcagtggc
gcaccggcgcagcgcgagccgctgcgcatgccgcgctgtgcggactggccggaattcgag
cggctgaacatggaggccgatgccatcggctttcacctgaccgggcacccgctggattct
tacggcccgctcatgcgcaggctcggcgcgatccgcgccacggggctggaggcggcggcg
caggccgggatcgggcgggtcaagatcgcgggctgcgtggtggaccgcaaggaacgcccc
acgcgcacgggcaacaagatggcgtgggtgcgcctgtcagatgcatcgggcgggtgcgag
gtcacgttcttttcggaggtgctgtcgcgcgcgcgcgaaattctggtggcgggtaatgcc
gtggtggtcactgccgacctcaagctggaaggcgaggcgctgcgcattaccgcatccgac
gtgatggaactcgaacaggccgcggcggaagcggcagccgaactgcgtatctggttcgat
caggccgaggccatcgagccgatccgcgatgtgctgcttggccatggcagcgggcgtgga
cgggtgatcctgatgccatcgctcgcggccacgcaggatgtggaactgaccctggccgag
cgctaccgcgtgaccccgcgcgtggcgcagatgatcaaggccattgaaggcgtgggcaag
gtcgagcagttctag
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