Komagataeibacter sucrofermentans: ACM0P6_10170
Help
Entry
ACM0P6_10170 CDS
T11177
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ksu Komagataeibacter sucrofermentans
Pathway
ksu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P6_10170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksu03019
]
ACM0P6_10170 (pnp)
03016 Transfer RNA biogenesis [BR:
ksu03016
]
ACM0P6_10170 (pnp)
Enzymes [BR:
ksu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACM0P6_10170 (pnp)
Messenger RNA biogenesis [BR:
ksu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACM0P6_10170 (pnp)
Transfer RNA biogenesis [BR:
ksu03016
]
Prokaryotic type
tRNA degradation factors
ACM0P6_10170 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XOO49766
LinkDB
All DBs
Position
2116257..2118395
Genome browser
AA seq
712 aa
AA seq
DB search
MFNYFRKEMEWGGRPLVLETGKVARQADGAVVVTYGDTVVLCTAVGAKSVKPGQDFFPLT
VNYQEKAYAAGKIPGGFFKREGRPSEAEVLNSRLIDRPLRPLFPENFRNEVQVVATVLSH
DMENDPAVVALIGCSAALTLSGIPFFGPVGAARVGYANGEYVLNPTISQLKDSALDLVVA
GTAEGVLMVESEAVELSEDVMLGAVTFGHEAFQPVIDLIIDLAEDAAKAPWDLAEPTAEE
IKLRKKVDKAGRALIAEAYKERAKQVRYKKVAAAREAILAKIGEAEADAAKPMIKDLEAD
VVRTEVLDTGYRIDGRDLETIRPIVSEVGILPRAHGSALFTRGETQALVVATLGTGQDEQ
IVDALEGEYRNNFMLHYNFPPFSVGECGRMGSPGRREIGHGKLAWRAIHPLLPGKDTFPY
TMRVVSEITESNGSSSMATVCGTSLALMDAGVPLKRPVAGIAMGLIKEDEDFAVLSDILG
DEDHLGDMDFKVAGTEQGVTALQMDIKITSITPEIMKIALGQARNGRMHILGEMAKALTE
GRTDVSSSAPKITTISVPKEKIRDVIGQGGKVIREIVEYSGAKIDINDDGTIMIAASSDD
QAEKAIERIRGIVAEPEVGHIYNGKVVKTADFGAFVNFLGPRDGLVHISELAQGRVSKTT
DVVKQGDEVKVKVLGFDDRGKVKLSMRVVDQETGADIAETVGAKPGRAPAAR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattattttcgcaaggaaatggaatggggcggtcgcccgctggttctggaaacg
ggcaaggtcgcccgccaggccgatggcgcggtggtcgtaacctatggcgacacggtggtg
ctgtgcacggccgttggcgccaaaagcgtcaagccggggcaggacttcttcccgcttacg
gtcaactaccaggaaaaagcctacgcggcgggcaagatccccggtggcttcttcaagcgt
gaaggccgcccgagcgaggccgaggtgctgaactcgcgcctgatcgaccgcccgctgcgc
ccgctcttccccgagaacttccgcaatgaagttcaggtcgtggccaccgtgctcagccac
gacatggaaaacgatcccgccgtcgtggcgctgatcggctgctcggcagcactcacgctg
tcaggcattccgttctttggcccggtgggtgcggcccgcgtgggctacgccaacggcgaa
tacgtgctcaacccgaccatctcgcagctcaaggacagcgcgcttgacctggtcgtggcc
ggcaccgccgaaggcgtgctgatggtcgagtccgaggcggtcgagctgtccgaggacgtg
atgctcggcgccgtgacgtttggccacgaagccttccagccggtgatcgacctgatcatc
gacctcgccgaagatgccgccaaggccccgtgggacctggccgagccgacggcagaggaa
atcaagctgcgcaagaaggtggacaaggccggtcgcgccctgatcgccgaggcctacaag
gaacgcgccaagcaggtgcgttacaagaaggtcgccgccgcccgtgaggcgatccttgcc
aagatcggcgaggccgaggccgatgccgccaagccgatgatcaaggatcttgaggccgac
gtggtgcgcaccgaggtgctcgacaccggctaccgcattgatggccgcgacctcgagacg
atccgcccgatcgtgtccgaagtcggcatcctgccgcgcgcgcatggctccgccctgttc
acccgtggcgagacgcaggcccttgtggtcgcgacccttggcaccggccaggacgagcag
atcgtggacgcgctggaaggcgagtaccgcaacaacttcatgctgcactacaacttcccc
ccgttctcggtgggtgagtgcgggcgcatgggctcgccgggccgtcgtgaaatcggccat
ggcaagctggcatggcgcgccatccacccgctgctgccgggcaaggacaccttcccgtac
accatgcgcgttgtgtccgagatcacggaaagcaacggctcgtcctccatggcgaccgtg
tgcggcacgtcgctggcgctgatggatgcgggcgtgccgctcaagcgtccggtggccggt
atcgccatgggcctcatcaaggaagacgaggacttcgcggttctgtccgacatccttggc
gatgaagatcaccttggcgacatggacttcaaggtcgcgggcaccgagcagggcgtgacc
gcgttgcagatggacatcaagatcacgtccatcacccccgagatcatgaagatcgcgctg
ggtcaggcccgcaatggccgcatgcacatcctgggcgagatggccaaggcgctgaccgag
ggccgcacggatgtctcctcctccgcgccgaagatcaccacgatctccgtgccgaaggaa
aagatccgtgatgtgatcggccagggcggtaaagtcattcgtgagatcgttgaatattcg
ggtgcgaagatcgatatcaacgatgacggcacgatcatgatcgccgcgtcctccgacgat
caggccgagaaggccatcgagcggatccgtggcatcgtggctgaacccgaagtgggccac
atctacaacggcaaggtggtcaagaccgccgatttcggggcgttcgtcaacttcctcggc
ccgcgtgatggtctggtgcacatctccgagctggcacagggccgggtctccaagacgacg
gacgtggtcaagcagggcgatgaagtgaaggtgaaggttctgggctttgatgaccgcggc
aaggtgaagctgtccatgcgcgtggttgatcaggagaccggtgccgacattgccgagacc
gtgggcgccaagcccggccgtgctcccgccgcacgctaa
DBGET
integrated database retrieval system
