KEGG   Komagataeibacter sucrofermentans: ACM0P6_12265
Entry
ACM0P6_12265      CDS       T11177                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ksu  Komagataeibacter sucrofermentans
Pathway
ksu02024  Quorum sensing
ksu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ksu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACM0P6_12265 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACM0P6_12265 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ksu03019]
    ACM0P6_12265 (hfq)
   03036 Chromosome and associated proteins [BR:ksu03036]
    ACM0P6_12265 (hfq)
Messenger RNA biogenesis [BR:ksu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ACM0P6_12265 (hfq)
Chromosome and associated proteins [BR:ksu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ACM0P6_12265 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: XOO50131
LinkDB
Position
2568325..2568603
AA seq 92 aa
MAKEPSQNVQDVFLNHVRRSKTPVTIFLVNGVKLQGIITWFDNFFVLLRRDGHTQLVYKH
AISTVMPATPVSLFDPPAEDTEEPAATDGSPS
NT seq 279 nt   +upstreamnt  +downstreamnt
gtggcaaaagaaccttcacagaatgtacaggacgtgtttctcaaccacgtccgccggtcg
aaaacgccggtcaccattttcctcgtcaatggcgtcaagcttcagggcatcatcacctgg
tttgacaattttttcgttctgctgcggcgcgacgggcatacgcagcttgtctacaagcac
gcgatcagcaccgtcatgcccgccacccccgtcagcctgtttgatcccccggctgaggat
acggaagaacctgctgccacggatggcagcccgtcgtga

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