Komagataeibacter sucrofermentans: ACM0P6_12265
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Entry
ACM0P6_12265 CDS
T11177
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ksu Komagataeibacter sucrofermentans
Pathway
ksu02024
Quorum sensing
ksu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P6_12265 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACM0P6_12265 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksu03019
]
ACM0P6_12265 (hfq)
03036 Chromosome and associated proteins [BR:
ksu03036
]
ACM0P6_12265 (hfq)
Messenger RNA biogenesis [BR:
ksu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACM0P6_12265 (hfq)
Chromosome and associated proteins [BR:
ksu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACM0P6_12265 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
XOO50131
LinkDB
All DBs
Position
2568325..2568603
Genome browser
AA seq
92 aa
AA seq
DB search
MAKEPSQNVQDVFLNHVRRSKTPVTIFLVNGVKLQGIITWFDNFFVLLRRDGHTQLVYKH
AISTVMPATPVSLFDPPAEDTEEPAATDGSPS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagaaccttcacagaatgtacaggacgtgtttctcaaccacgtccgccggtcg
aaaacgccggtcaccattttcctcgtcaatggcgtcaagcttcagggcatcatcacctgg
tttgacaattttttcgttctgctgcggcgcgacgggcatacgcagcttgtctacaagcac
gcgatcagcaccgtcatgcccgccacccccgtcagcctgtttgatcccccggctgaggat
acggaagaacctgctgccacggatggcagcccgtcgtga
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