Komagataeibacter sucrofermentans: ACM0P6_13480
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Entry
ACM0P6_13480 CDS
T11177
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ksu Komagataeibacter sucrofermentans
Pathway
ksu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM0P6_13480 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksu03019
]
ACM0P6_13480 (recQ)
03400 DNA repair and recombination proteins [BR:
ksu03400
]
ACM0P6_13480 (recQ)
Enzymes [BR:
ksu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACM0P6_13480 (recQ)
Messenger RNA biogenesis [BR:
ksu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACM0P6_13480 (recQ)
DNA repair and recombination proteins [BR:
ksu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACM0P6_13480 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
QueC
Motif
Other DBs
NCBI-ProteinID:
XOO50352
LinkDB
All DBs
Position
2840945..2842783
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AA seq
612 aa
AA seq
DB search
MTTPEGGTRDPRAVLAEVFGFPDFRGLQQQAVAEVMAGRDCLVLMPTGGGKSVCYQVPAL
ARPGTGLVISPLIALMDDQVAALRQLGVNAGALHSEQEPEDAARVRSDLMAGRLDILYVS
PERLLSPGMLDRLGRLTLSVIAIDEAHCISAWGHEFRPEYRELAALPQHFPNVPRIALTA
TADARTRSDILEALAMPDATVLKASFHRPNLDIAVKPKTSEIRQLTAILDRHRGAASIVY
CGSRSKTERVARSLAGKGYAALPFHAGLSPVEKRAALMRFRSGEPVVIVATIAFGMGIDR
PDVRAVVHLDMPSSPEGYYQQIGRAGRDGEQAETVLLYGGDDMARARYWLEQSNAPDAQK
RIMSARLEAMIALTETTGCRTQALLSCFGEELDEACGHCDNCRSPVATFDGTVAAQKVLS
AIYRTGQRFGAVHVAGVLRGKTSDMTARHGHEKLSVFGIGRDRPEPFWRGVIRQLIARGA
IRVTGEYNALALEEGRARPILRGEQPIMLREDATEDLKATAVRGVGGGTRPAMADLTPEA
AARYEALRNWRLGEAREQEIPPYVIFHDAVLHDIALERPTSLDELGMIRGVGGSKLARYG
EAVLDVLAQTGA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcccgaaggcggcacgcgcgacccgcgcgcggtgctggccgaggttttcggc
tttcccgatttccgcggcctgcagcagcaggcggtggcggaggtcatggccgggcgcgac
tgccttgtgctcatgcccaccggcggcggcaagagcgtgtgctaccaggtgcccgccctt
gcccggcccggcacggggctggtcatatcccccctgattgcgctgatggatgaccaggtt
gccgcgctgcggcagcttggcgtcaacgcgggtgccctgcattccgagcaggaaccagag
gatgctgcccgcgtgcgttccgacctgatggcggggcggctcgacattctttacgtttcg
cccgagcgcctgctctcgccgggcatgctcgaccggctcgggcggctgacgctctcggtc
atcgccattgacgaggcgcactgcatctcggcctgggggcatgagttccgccccgaatac
cgcgagcttgcggcattgccgcagcatttccccaatgtgccgcgcatagccctcaccgcc
acggcggatgcacgcacgcgcagcgacatccttgaagccctggccatgcccgatgccacg
gtgctcaaggccagcttccaccgccccaatcttgatattgcggtcaagcccaagacatcg
gaaatccgccagctcaccgccattctcgaccggcatcgcggggcggcctccatcgtgtat
tgcggcagccgcagcaagaccgagcgcgtggcccgctcgcttgcgggcaagggctatgcg
gcgctgccgttccatgccggtctctcgccggtggaaaagcgtgcggcactgatgcgcttc
cgctcgggcgagccggtggtgatcgtggccaccatcgcctttggcatgggcatcgaccgg
cccgacgtgcgcgccgtggtgcatctggacatgccctcctcgcccgaagggtattaccag
cagatcggccgcgccgggcgcgatggcgagcaggcggaaaccgtgctgctttatggcggc
gatgacatggcccgcgcgcgttactggctggagcagtccaacgcgcccgatgcgcagaaa
cgcatcatgagcgcacggctcgaagccatgatcgccctgaccgaaaccacgggctgccgc
acgcaggcgctgctctcgtgctttggcgaggaactcgatgaagcctgcggccattgcgac
aactgccgcagcccggtggccacgtttgatggcacggtggccgcgcagaaggtgctctcg
gccatctaccgcaccgggcagcgctttggcgcggtgcatgtggcgggcgtgctgcgcggc
aagacatcggacatgacggcgcggcacgggcatgaaaagctgagcgtgttcggcataggc
cgcgaccggcccgagccgttctggcgtggcgtgatccgccagctcatcgcgcgcggcgcc
atcagggtaacgggcgaatataacgccctggcccttgaggaagggcgcgcgcggcccata
ttgcggggtgagcagccgatcatgctgcgcgaggacgcaaccgaggatctcaaggccacc
gcagtgcgtggcgtcggcggcggcacccggcctgccatggccgacctgacgcctgaggct
gccgcccgctacgaggcgctgcgcaactggcggctaggcgaggcccgtgagcaggaaatt
ccgccctatgtcatttttcatgatgccgtgctgcatgatattgcccttgagcggccgacc
tcgcttgatgaacttggcatgatccgtggcgtggggggctcgaaactggcccgctacggt
gaggcggtgctcgatgtgctggcgcaaaccggggcctga
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