Kosakonia styphnolobii: Q5705_12335
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Entry
Q5705_12335 CDS
T11811
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ksy Kosakonia styphnolobii
Pathway
ksy00310
Lysine degradation
ksy01100
Metabolic pathways
ksy01110
Biosynthesis of secondary metabolites
ksy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ksy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
Q5705_12335
Enzymes [BR:
ksy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
Q5705_12335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WLI75387
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All DBs
Position
complement(2617105..2619243)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELEQALQAQGFQIIWPRNSTDLLKFIEHNPRICGVIFDWD
EYNLDLCSEINQLNEYLPLYAFINTHSTLDVSAQDMRMALWFFEYALSVADGIATRIAQY
TKEYLENITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVIPLWLKPGRNALGILGGIPRREFTNDSIEQKIVATTGATWPVH
AVITNSTYDGLLYNTDWIKKTLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGDRVAGKVFY
ETQSTHKMLAAFSQASLIHIKGEYDEDAFNEAFMMHTTTSPSYPLVASIETAAAMLRGNP
GRRLINRSVERALHFRKEVQRLKEEADGWFFDIWQPEEIDEAECWPVASGEGWHGFREAD
DDHMFLDPVKVTILTPGMDEVGNMGEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLMEFKRAYDLNLRVRNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPRLMLQAFDVLPEMKLTPHQAWQRQIQGEVETVALEELIGRISANMILPYPPGVPLVM
PGEMITEKSRAVLDFLLMLCAIGRHYPGFETDIHGAKRDEEGVYHVRVLKAS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattattgccatcatgggaccacatggcgttttctacaaagatgagccaatcaag
gagctggagcaggcgctacaggcgcaggggtttcaaattatctggcccagaaacagcacc
gacttactgaaatttatcgaacacaacccgcgcatctgcggcgtgatctttgactgggat
gagtacaatctcgatttgtgcagcgagatcaaccagcttaacgaatatcttccgctgtac
gccttcatcaatacccactctacgctggacgtcagcgcccaggacatgcgcatggcgctg
tggtttttcgaatatgccctgagcgtggccgacggcatcgcgacgcgtatcgcgcaatac
accaaagagtatctggaaaacatcacgccgccgtttacccgggcgctgtttacctatgtg
aaagaggggaaatacaccttttgcacgccggggcatatggcgggaacggcgtatcagaaa
agcccggtgggctgcctgttttacgacttcttcggcggaaataccttaaaagcggatgtc
tcgatctcggtgaccgaactgggatcgttgctcgatcataccggcccgcacctggaagcc
gaagagtatatcgcccgcacatttggtgccgagcagagctatatggtgaccaacggcacg
tccacgtccaataagatcgtcggcatgtatgccgccccggcgggcagtacgttacttatc
gatcgtaactgtcataaatccctcgcccatctgttgatgatgagcgatgtcattccgctg
tggctgaaaccggggcgcaatgcgctggggattttgggcggtattccgcgccgtgaattt
acgaacgacagtattgaacagaaaatcgttgcgacaaccggtgcaacctggccagtccat
gcagtgatcaccaactcgacttacgatgggctgctgtataacacggactggatcaaaaag
acgctggatgtgccgtcgatccacttcgattctgcctgggtgccgtacaccaatttccat
ccaatctatgccgggaaaagcggcatgagcggcgatcgcgtcgcggggaaagtgttttac
gagacccagtcgacacacaaaatgctggccgctttttcccaggcttcacttattcatatc
aaaggtgaatatgacgaagatgcctttaacgaggcgtttatgatgcacaccaccacctcg
ccgagttatccgctggtggcctctatcgaaacggcggcggccatgctgcgcggcaatcct
ggcaggcggctgattaaccgttcggtcgagcgcgcgttgcactttcgcaaagaggtgcag
cgcctgaaagaagaagccgacggctggttttttgatatctggcagccggaagagattgat
gaagccgagtgttggccggtggcgtccggtgagggctggcacggtttccgcgaagccgat
gacgaccatatgttcctcgatccggtcaaagtcaccatcctgacgccgggcatggatgaa
gtcggcaatatgggcgaagagggcattccggcggcgctggtggcgaaattcctcgacgag
cgcggcgtagtggtggagaaaaccggcccctataacttactgttcttgttcagtattggc
atcgataaaacccgggccatggggctgttgcgcggattaatggaatttaagcgcgcctat
gatctaaacctgcgagtgcggaacatgttgccggatctctacgcggaagatcctgatttc
taccgcaatatgcgcattcaggatctggcgcaggggatccataagcttatccgccagcac
gacctgccgcgtttgatgctgcaagcgttcgatgtgctgccggaaatgaagctgacgccg
catcaagcctggcagcgccagattcagggcgaagtggaaacggtagcgctggaagagcta
atcgggcgcatttcagcgaacatgatcctgccttatccgccgggggttccgctggtgatg
cccggcgagatgatcaccgagaaaagccgggcggtgctcgatttcttgctgatgctctgc
gcaattggtcgccactatccggggtttgaaacggacattcacggggcaaaacgagatgaa
gagggcgtttaccacgtacgagtcctaaaagcgtcctga
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