Kosakonia styphnolobii: Q5705_18915
Help
Entry
Q5705_18915 CDS
T11811
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ksy Kosakonia styphnolobii
Pathway
ksy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q5705_18915 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ksy03021
]
Q5705_18915 (rho)
03019 Messenger RNA biogenesis [BR:
ksy03019
]
Q5705_18915 (rho)
Transcription machinery [BR:
ksy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Q5705_18915 (rho)
Messenger RNA biogenesis [BR:
ksy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q5705_18915 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WLI76618
LinkDB
All DBs
Position
4033998..4035257
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacatcattttcgccatcctgaag
cagcacgcgaagagtggcgaagatatctttggcgacggtgtgctggagattttgcaggat
ggatttggtttcctccgttccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcaccggtgacaccatttcaggtaag
attcgcccgcctaaagaaggtgaacgttactttgccctgctgaaagttaacgaggtgaac
tacgataaaccggaaaacgcgcgtaataagattctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggaacgtggtaatggctccaccgaagacttaaccgctcgc
gtactggatctggcgtcgccaatcggccgcggccagcgtggtctgatcgtggcaccgccg
aaagccggtaaaaccatgctgctgcaaaacatcgcgcagagcatcgcatacaaccatcct
gactgtgtgctgatggtgctgctgattgatgaacgtccggaagaagtaacagaaatgcag
cgcctggtgaaaggcgaagtggttgcgtcaaccttcgatgaacctgcttcccgccacgtg
caggttgctgaaatggttattgaaaaagccaaacgcctggttgagcacaagaaagacgtt
atcattctgctcgactccatcacccgtctggctcgcgcttacaacaccgtcgttccggcg
tccggtaaagtgttgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgctgcgcgtaacgtggaagagggcggtagcctgaccattatcgcgaccgcgctt
atcgataccggttcgaaaatggacgaagtgatttacgaagagtttaaaggcaccggtaac
atggagctgcatctctcgcgtaaaatcgctgaaaaacgcgtcttcccggcgattgattac
aaccgctccggtacccgtaaagaagagctgcttaccactcaggaagaactgcaaaaaatg
tggatcctgcgcaaaatcattcacccaatgggtgagatcgatgcgatggagttcctcatc
aacaagctggctatgacgaagactaatgacgagttcttcgacatgatgaagcgctcttaa
DBGET
integrated database retrieval system
