Kosakonia styphnolobii: Q5705_19050
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Entry
Q5705_19050 CDS
T11811
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksy Kosakonia styphnolobii
Pathway
ksy03420
Nucleotide excision repair
ksy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q5705_19050 (uvrD)
03430 Mismatch repair
Q5705_19050 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksy03400
]
Q5705_19050 (uvrD)
Enzymes [BR:
ksy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q5705_19050 (uvrD)
DNA repair and recombination proteins [BR:
ksy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q5705_19050 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Q5705_19050 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLI76641
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All DBs
Position
4060162..4062324
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPFSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTEGVDGEPISLYCAFNELDEARFVVNRIKAWQDNGGQLTQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRERQLTMWQATRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVISDSGLRSMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTMHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACIEEVRLRASVSRPVSHQRMG
TPIVASDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagcggcg
acacgcagcaatatgctggtgctggcgggcgcggggagcggcaagacgcgcgtgctggtg
caccgcatcgcatggctgatgaccgtcgaaaactgttcgccattctcaattatggcggtc
acctttaccaacaaagcggcggcggaaatgcgccaccgcatcggtcagttaatgggtacc
acccagggcggcatgtgggtcggtactttccacggcctggcgcaccgcctgctgcgtgcg
caccatatggacgctaacctgccgcaggatttccagatcctcgacagcgaagatcagttg
cgcttgctcaagcgcttgatcaaagccatgaatctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagatgaaggtatccgcccgcatcatattcaa
agcttcggtaatccggtggagcaaacctggcagaaagtctaccaggcctaccaggaagcc
tgcgatcgcgccgggctggtggattttgccgagctgctgctgcgcgcgcatgagctgtgg
ctgaacaagccgcatattttgcagcactaccgcgaacgctttaccaatatcctggtggac
gaattccaggataccaacaacattcaatacgcgtggatccgcctgttggcgggcgatacc
ggcaaagtgatgatcgtcggcgatgacgatcagtccatttacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaatgattttcccggtgcacaaaccatccgcctggag
cagaactaccgctccaccagcaatattctgagcgccgctaacgccctgattgaaaataac
aacgggcgtctgggtaaaaagctgtggaccgaaggtgttgatggcgaaccgatttcgctc
tactgcgcctttaacgagctggatgaagcgcgctttgtggttaaccgtatcaaagcctgg
caggacaatggcgggcaactgacgcagtgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgttattgcaggcgagtatgccgtaccgcatttatggcggtatg
cgcttcttcgagcgtcaggaaatcaaagacgcgctctcctatctgcgtctgattgccaac
cgcaatgacgatgccgcgtttgaacgcgtggtgaatacgccgacgcgcgggattggcgat
cgcacgctggatgtggtgcgtcagacgtcccgtgaacgacagttgacgatgtggcaggca
acgcgtgagctactgcaagaaaaggcgctggcgggccgcgcagccagcgcgctgcaacgg
ttcctggaattgattgatgcgctggcgcaagagacagccgatatgccgctgcacgtgcag
accgaccgggttatcagtgattccggcttgcggtcaatgtacgagcaggaaaagggcgag
aaaggccagacgcgtattgagaacttagaggaactggttaccgcgacgcgccagttcagc
tacaacgaagaagatgaagatttaatgccgctacaagcgttcctctctcacgctgcgctg
gaagcgggcgaagggcaggcggacacctggcaggacgcggtgcaattaatgacaatgcac
tcggcaaaaggccttgagttcccgcaggtgtttatcgtcggtatggaagagggaatgttc
ccgagccagatgtcgctggatgaaggcgggcgtctggaagaggagcgtcgcctggcttac
gtcggcgtgacgcgcgcgatgcaaaaactgaccttaacctacgcggaaacgcgccgactg
tacggcaaagaggtgtatcaccgcccgtcgcgctttatcggcgagctgccggaagcgtgt
attgaggaggtgcgtttgcgcgccagcgtcagccgcccggtaagccatcagcgtatggga
accccgattgtggcgagcgataccggctataaactcggccagcgtgtgcgtcatgcgaaa
tttggcgaaggcacggtggtgaatatggaaggcagcggcgaacacagccgcttacaggtg
gcgttccaggggcagggcatcaagtggctggtcgccgcttacgcgaagctggaaaccgtg
taa
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