Kurthia sp. 11kri321: ASO14_1999
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Entry
ASO14_1999 CDS
T04250
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kur
Kurthia sp. 11kri321
Pathway
kur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASO14_1999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kur03019
]
ASO14_1999
03400 DNA repair and recombination proteins [BR:
kur03400
]
ASO14_1999
Enzymes [BR:
kur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASO14_1999
Messenger RNA biogenesis [BR:
kur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASO14_1999
DNA repair and recombination proteins [BR:
kur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASO14_1999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
P-loop_SecA
HEM4
FTHFS
Motif
Other DBs
NCBI-ProteinID:
AMA62227
LinkDB
All DBs
Position
complement(1936646..1938082)
Genome browser
AA seq
478 aa
AA seq
DB search
MLEKALKKYFHYDTFRPGQREVIEAVLQEKDVIALLPTGSGKSLCYQLSGYLLNGAVVIV
SPLLSLMQDQVEQMKRFGEKRVVAINSFLQGEQRERVLANLQAYRYIFVSPEMLGQKSFK
RALSRVHIALIAVDEAHCISQWGFDFRPEYLNIGDTIRTFSRVPVLALTATATNRVKEDI
RKYLHMENPYEWISAVDRPNICYQVVPIQKHYEKIGWLVAHVQHTTSPGIIYTQSRKKTE
EYAEALRESGVRVAAYHAGIQQDERQLIQHQFIAGELDWIVATNAFGMGVHKENIRQIIH
DHLPSSMGNYLQEVGRAGRDGEQSFATLLFTEEDDRITKSVSVMDYPQEFHIDEYERLAN
QGVNPFIMVEESRITETSYRILHYWMHKLPKIEVIEQINQMKFEKVKEVDQLQQILTGKD
CIREEISRYFEQELLTKPVLCCSVCGLPEDVIPKKRLIKEASAQLFSWQERFKQIFPN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaaagcattaaaaaaatactttcattacgatacatttcgtccaggtcaaaga
gaagtgattgaagctgttttacaagaaaaggatgtgattgcacttcttccaacagggagt
ggaaaatcactatgttatcaattgagtggttatcttttaaatggagcggtagtcatcgtt
tcgccattactatcactcatgcaagatcaagtagagcagatgaagcggtttggtgaaaaa
cgcgtagttgccatcaattcatttttacaaggcgaacaacgtgaacgtgtgttagcgaat
ttacaagcgtatcgctatatttttgtatcgcctgaaatgttaggacaaaaaagttttaag
cgagctctttcgcgtgttcatattgcattaattgcagtagacgaagcacactgtatttct
cagtgggggtttgattttcgaccagaatatttaaatattggtgatactattcgtacattt
tcacgtgtaccagttttagcattaacagctactgcaacgaatcgtgtgaaagaagatatt
cgaaaatatttacatatggaaaatccttatgaatggatttcagctgtggatcgcccgaat
atttgctaccaagtagtacctattcaaaaacattatgagaaaataggttggttagttgcg
catgtacaacatacgacttcacctggcattatttatacacaatcacgtaagaaaacagaa
gaatatgcagaagctttacgtgaatctggcgtgcgtgtagcagcctatcatgcagggata
caacaagatgaacggcaattgatacaacatcaatttattgcaggtgagcttgattggatt
gttgcgacgaatgcttttggtatgggtgttcataaagaaaatattcgtcaaattattcat
gaccatctaccaagttcgatggggaattatttacaagaagtaggtagagctggacgagat
ggtgaacagtcttttgcaacattattatttacagaagaagatgatcgtattacaaaatca
gtgagtgtaatggattaccctcaagaatttcatattgatgaatatgagcggttagcgaat
caaggcgttaatccttttattatggtagaagaaagtagaatcactgaaacaagttatcgt
attttacattattggatgcataaattaccaaaaatagaggtaatagaacaaataaatcaa
atgaaatttgaaaaagtgaaagaagtcgaccaattgcaacaaattttaacagggaaagac
tgtataagagaagaaattagccgatattttgaacaggaactcctaacgaagcctgtgtta
tgttgttccgtatgtggtctaccagaagacgtaataccgaagaagcgattaataaaagaa
gcatcagctcaacttttttcatggcaagaacgttttaaacaaatatttccaaattaa
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