Kurthia sp. 11kri321: ASO14_2545
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Entry
ASO14_2545 CDS
T04250
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kur
Kurthia sp. 11kri321
Pathway
kur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASO14_2545 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kur03021
]
ASO14_2545 (rho)
03019 Messenger RNA biogenesis [BR:
kur03019
]
ASO14_2545 (rho)
Transcription machinery [BR:
kur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ASO14_2545 (rho)
Messenger RNA biogenesis [BR:
kur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASO14_2545 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
NACHT
AAA
AAA_22
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMA63706
LinkDB
All DBs
Position
complement(2510498..2511781)
Genome browser
AA seq
427 aa
AA seq
DB search
MPALTISQLEDMKLKDLYALAKEYKVSYYSKLTKKELIFAILKSRAEQEGYFFMEGILEI
VSQEGFGFLRPINYSPSSEDIYISASQIRRFSLRNGDKVTGKVRPPKENERYYGLLHVEA
VNGENPETAKERVHFPALTPLYPDRQIKLETTPTKLSTRIMDLVAPVGFGQRGLIVAPPK
AGKTLLLKEIANAITEKYPEAELIVLLIDERPEEVTDIERSVQADVVSSTFDELPENHVK
VAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDEVIYEEFKGTGNLELHLDRNLAERRIFPAIDIR
RSGTRKEELLIPKEQLNKLWGIRKTFADAPDFTEKFLKKLRTCKTNEEFFEKLDSSMKKA
TNGKGLI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccggcattaacaatttcacaacttgaggatatgaaactcaaggatctttatgcgctc
gcaaaagagtataaagtatcttattatagtaaattaacgaaaaaagaattaatctttgct
attttaaaatcaagagctgaacaggaaggatacttcttcatggaagggattttagaaatc
gtctcacaagaaggtttcggattcttacgtccaattaactattcgccaagttctgaagat
atttatatctctgcatctcaaattcgtcgttttagcttacgtaatggagataaagtaacg
ggtaaagtacgtccaccaaaagaaaacgaacgttattatggtttactacacgtagaagca
gtaaatggtgagaatcctgagactgcaaaagaacgtgttcattttccggctttaacacca
ctatatccagatcgacaaatcaaactagaaacaacaccgacgaaattatcaacacgaatt
atggatttagttgcaccggttggttttggacaacgtgggttgattgtagcgccaccaaaa
gcaggtaaaacgctattattaaaagaaatagcgaatgccattacagaaaagtatcctgaa
gctgaattaattgttttattaatcgatgaacgtcctgaggaagtaacagatattgagcgt
tctgttcaagcggatgttgtcagctcgacattcgatgaattacctgaaaatcatgtaaag
gtagcagaattagtattagagcgtgcgatgcgccttgtggaacataaacgtgatgtcatt
attttaatggactcgattacacgtttagcacgtgcttataacttggttattccaccaagt
ggacgtacactttcaggtggtattgacccagctgccttccatcgtccaaaacgattcttc
ggtgctgcacgtaatatcgaagagggcggaagtctaacaattttagcaactgctctagtt
gatacgggttcacgcatggatgaagtgatttatgaagagttcaaaggtacagggaactta
gaattgcacttagatcgaaatttagcagagcgtcgtattttcccagcgattgatattcgt
cgttcaggaacacgaaaagaagaattactcattccaaaagaacaattgaataagttgtgg
ggaattcgtaaaacatttgcggatgcacctgactttacagagaagttcttgaaaaaacta
cgtacatgtaaaacgaatgaagaattttttgaaaagcttgattcaagtatgaaaaaagca
acgaatggtaaagggcttatttaa
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