Kurthia sp. 11kri321: ASO14_2837
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Entry
ASO14_2837 CDS
T04250
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kur
Kurthia sp. 11kri321
Pathway
kur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASO14_2837 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kur03400
]
ASO14_2837 (mfd)
Enzymes [BR:
kur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASO14_2837 (mfd)
DNA repair and recombination proteins [BR:
kur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ASO14_2837 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
MFD_D3
UB2H
AAA_22
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AMA63182
UniProt:
A0A0X1RXG3
LinkDB
All DBs
Position
complement(2798151..2801672)
Genome browser
AA seq
1173 aa
AA seq
DB search
MEILRRLLMKDMEVAALIEDIRREQPAQLVTGLSGSARSAFIATMYAETKKSIYMIAPNM
LQAQSLYEDLSKLIGSDEVHYYPADEFIAADMALASPELRAQRIATLDHMIHDVQGIYII
PAAGMRKVMTPKEQWSSLRYTLKLGDDLDTQELLKQLVMMGYTRNGMVTTPGEFAVRGGI
IDIYPPYDDHPVRIELFDTEIDSIRTFSADDQRSIAKLQEMVILPAMEFVLSTDERHALA
ERLEAGLSESLKKVKTDAVKTALYENVQADIALLQQGELPEYVNRYGSLLYENLTFLGDY
FKRDGIVIFDELTRIQETMEAWDSEEKEWLLEMIELGKMLHSVKPSFSFKELLANIEQQK
IFFALFARGFKGMTFTTTRNFSCKPMQHFHGQIALLNSEIERWVSSDFTTLFLTENEERI
DILQNLLADHGVEVQLGEPNGPGVFIMSGALTNGFEMPIPKLAIVTEDELFKQQKKRKAR
PKTMTNAERIKSYTEIKPGDYIVHVHHGIGKYIGIETLEINGNYKDYLHIRYRADDKLYV
PVDQIDLVQKYVGSEDKEPKLHKLGGAEWKKTKTKVSKAVQDIADDLIKLYAEREAAKGF
AFSPDGDEMHQFEAAFPYEETEDQLRTIQEVKMDMERERPMDRLVCGDVGYGKTEVAIRA
AHKAILDGKQVAFLVPTTILAQQHYETMLDRFQDLPVNIGLLSRFRTRKQQTETLKALKD
GQVDILIGTHRILSKDVIYKDLGLLIVDEEQRFGVTHKEKIKTLKTNIDVLTLTATPIPR
TLHMSMVGVRDLSVIETPPANRFPVQTYVMEHNGALVREAIEREMSRGGQVFYLHNRVED
MAKQVDQIQSLVPEARVAYAHGKMTENELESIILGFLEGEFDVLVTTTIIETGIDIPNVN
TLIVNNADRMGLSQLYQLRGRVGRSNRVAYAYFMYQRDKVLTEVAEQRLQAVKEFTELGS
GFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFDLYSQMLEDAVTEKQTGEKKTEEKGIEIL
LPYDAYLPDTYIPDGYQKIQMYKRIKAIETEEAYHEISEELVDRFGDLPIEVDRLMRIAR
MKAWGLEVGLESIKLKNKMYRITLSMDGTQRIDGSKMVSDSMVLGRAVGFTLEDGKLVLT
IDERKMSKDQDVFDLVEAVVQLLPASLKEENPA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcttacgtcggttattgatgaaagacatggaagtagcagcattaattgaagat
ataagaagagaacaacctgcacaacttgtaacaggattatccggaagcgcaagatcggct
ttcatcgctacaatgtatgcagaaacaaaaaaatcaatctacatgattgcaccgaatatg
ttgcaagcacagtctttgtatgaggatttatcaaaattaattggtagtgatgaagtacat
tactacccagcagatgagtttatcgcggcagatatggctttagcaagtcccgaattacgt
gcacagcgtatcgcaacgctggatcatatgattcatgatgtacaaggaatctatattatc
cctgctgctggtatgcgtaaagtaatgacgccaaaagaacagtggtcatcacttcgttat
acattaaaactcggcgatgatttagatacacaggaactattgaagcaattagtcatgatg
ggctatacgcgaaatggtatggtgacaactcccggcgagttcgctgttcgaggtggaatt
atcgatatttatccaccatatgatgaccatcctgttcgaattgagctgtttgatactgag
attgattcgattcgtacgttctcagcagatgatcagcgttcaattgcgaaattacaagag
atggtgatcttaccagcgatggagtttgtattatctacagatgaacgacacgcccttgca
gaacgtttagaagctggtttaagtgaaagtttaaaaaaggtaaagacagatgcagtaaaa
acagcactttatgaaaatgtacaagcagatattgcgctattacaacaaggtgaattacct
gagtatgtaaatcgctatggctctttattatatgaaaacctaacttttttaggtgattat
ttcaaacgagatggcattgtaatttttgatgaattaacacgtattcaagaaacaatggaa
gcgtgggattcagaggaaaaagaatggctgcttgagatgattgaactcggtaagatgttg
cacagtgtgaaaccatctttcagctttaaagaattacttgcgaatatcgagcaacaaaaa
atcttctttgcattatttgcgcgtggatttaaaggaatgacgtttacaacaacacgtaat
ttttcatgtaaaccgatgcaacatttccacggacagattgctctgttgaatagtgaaatt
gaacgttgggtgtcaagtgactttacaacgctctttttaacagagaatgaagaacgaatt
gatatattgcaaaatctattggcagaccacggtgtagaagtacagctcggtgaaccgaat
ggaccgggtgtcttcattatgtctggtgctttaactaatggttttgagatgccaattcct
aaattagcaatcgtgacagaagatgagctatttaagcaacaaaagaaacgtaaagcacgt
cctaaaacgatgaccaatgccgaacgaattaaaagctatacagagattaaaccaggggat
tatattgtccatgtacatcatggtattggtaaatatattggcattgaaacactcgaaatt
aatgggaactataaagattatttgcatattcgttatcgtgcagacgataagttatatgtg
ccagtcgaccaaattgacttagttcaaaaatatgtaggttcagaagacaaagagccaaag
cttcacaaattaggcggagcagagtggaaaaagacgaaaaccaaagtatcgaaagcagtt
caagatattgcggatgatttaattaagctatacgctgaacgcgaagcagcaaaaggtttt
gccttctctcctgatggcgatgagatgcatcaatttgaagctgccttcccatatgaggaa
acagaagaccaactacgcacaattcaagaagtgaaaatggatatggagcgtgaacgtcca
atggatcgccttgtttgtggagatgtaggttatggaaagacagaagtagccattcgtgca
gcgcataaagcaattttagatggtaaacaagtcgctttcttagtgccaacaacgatttta
gcacagcaacattatgaaacaatgctcgaccgattccaagaccttccggttaatatcggt
ttacttagccgcttccgtacacgtaaacaacaaacggaaacattaaaagccttgaaagat
ggacaagtagacattttaatcgggacacatcgtattttatcaaaagatgtgatttataaa
gatttagggttattaattgttgatgaagagcagcgttttggtgtcacacataaagagaaa
attaagacattgaaaacaaatattgacgtgctaacgttaaccgcaacaccgattccacgt
acgcttcatatgtcgatggtcggtgtacgcgatttatccgttattgaaacacctcctgca
aaccgtttcccagtacaaacgtatgtcatggaacataatggcgcacttgtacgagaagcg
attgagcgtgagatgtcgcgtggtggacaagtcttctacttacacaatcgtgtagaggat
atggcaaaacaagtcgatcaaattcaatcactcgtacctgaagcgcgtgttgcgtatgcg
catgggaagatgacggagaatgaattagaatcaatcattttaggcttcttagagggcgaa
tttgatgtgttggttacaacaacgattattgagacaggaattgatattccaaacgttaat
acgctgattgtgaacaatgcagaccgtatgggattatcacaactttaccaattacgtgga
cgtgtaggacgttctaatcgtgttgcttatgcatacttcatgtatcaacgtgataaagta
ctgacagaagttgcggaacaacgtttacaagcggtaaaagaatttacggaacttggttct
ggttttaaaattgcgatgcgcgatttatccattcgcggcgcagggaatttactcggtgcg
caacaacatggctttattgattcagttggtttcgacttgtattcacaaatgcttgaagat
gccgtaactgaaaaacaaacaggtgagaaaaagaccgaagaaaaaggaatcgagattctt
cttccgtatgatgcatatttaccggatacgtatattccagacggttatcaaaaaattcaa
atgtataagcgtattaaagcgattgaaacagaagaagcttatcacgaaatttcagaagaa
ttagtagaccgttttggtgacttgccaatcgaagtggatcgcttaatgcgtattgcacgt
atgaaagcatggggattagaagttggcttagagtccatcaaactaaaaaataaaatgtac
cgtattacgctatcaatggatggtacacaacgaattgatggtagtaagatggtttctgat
tcgatggttttagggcgagcagttggctttacattggaagatggaaaacttgttttaaca
attgatgaacgaaagatgtcaaaagatcaagatgtctttgatttggttgaagcggttgtt
caattattgccagcttcactaaaagaagaaaatcctgcataa
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integrated database retrieval system
