Kurthia sp. 11kri321: ASO14_2975
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Entry
ASO14_2975 CDS
T04250
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase dbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kur
Kurthia sp. 11kri321
Pathway
kur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASO14_2975 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kur03019
]
ASO14_2975 (dbpA)
03009 Ribosome biogenesis [BR:
kur03009
]
ASO14_2975 (dbpA)
Enzymes [BR:
kur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ASO14_2975 (dbpA)
Messenger RNA biogenesis [BR:
kur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASO14_2975 (dbpA)
Ribosome biogenesis [BR:
kur03009
]
Prokaryotic type
rRNA helicases
ASO14_2975 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
SWI2_SNF2
S1-P1_nuclease
Motif
Other DBs
NCBI-ProteinID:
AMA63726
UniProt:
A0A0X1RYX8
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All DBs
Position
2935545..2936987
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AA seq
480 aa
AA seq
DB search
MHSFSHYIQDSKVLQAIEDLGYKKPTPIQEKVLPIVQSKQDVIAKSKTGSGKTAAFAIPL
IEQMNWEENKPQVLVLVPTRELAVQVKEDFTNIGRYKRIKAVAVYGRQPIRFQMTALRQK
THVVVGTPGRIMDHIERGTLHLDQLTTLVIDEADELLHMGFIDQVEKIIKKLPTKRQTLL
FSATYADEIKRLAEKYMKTPVFIEHEAKEQEKTAIRQQRIQVKAEDKIRVLRDVTVVQNP
DSCIIFCNTKEQVRSVCDQLEKAHYSVDMLHGGMTQDDRLAVMKDFRKGDFRYLVATDVA
ARGIDIEGISLVVQYDVPFEKESYVHRMGRTGRAGQQGTAILLSSPNEKRYVQEIEEYIE
KTIPVEKAPTTEEVAENQAAFEEKMNTRPERKVMKSEQLNAHITKLYFNGGKKKKIRAVD
FVGTIAKIDGVTADDIGIITIEDACSFVEILNGKGTLVLKEMQNRTVKNKKLKVHVAKKA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcattcattttcacattatattcaagattcaaaagttttacaggccattgaggattta
ggttataaaaaaccaacaccgattcaagagaaagtgctaccaattgtacaatcaaaacaa
gatgtcattgcaaagtctaaaacaggtagcggaaaaacagctgcttttgcgattccacta
attgaacaaatgaattgggaggagaacaaaccgcaagtacttgtgcttgttcccacacgt
gaattagctgtacaagtaaaagaagattttacgaatatcggtcgttataaacgcattaaa
gcagtagctgtatatggtcgccaaccgattcgattccaaatgactgcactccgccaaaaa
acacacgttgttgtaggaacaccagggcgtattatggaccatattgagcgtggaacactt
catttagatcaactgacaacacttgttattgatgaagcagatgaattattgcacatggga
ttcatcgatcaggttgaaaaaatcattaagaagttaccaacaaagcgtcaaacactactt
ttctctgcaacatatgcagatgagattaaacgtttagctgagaaatatatgaaaacacct
gtctttattgaacatgaagcgaaagagcaagagaaaacggcgattcgtcaacaacgtatt
caagtgaaagcagaagataaaatacgtgtgttacgtgatgtcacagtcgtccaaaatcca
gatagttgtatcatcttttgtaatacgaaagagcaagtgcgttctgtatgtgaccaatta
gaaaaagcacactatagtgtggacatgctacatggtggaatgacacaagatgaccgatta
gctgtcatgaaagattttagaaaaggcgacttccgttacttagttgcaacagatgtcgca
gcacgtggtattgatattgaaggaatctcacttgtagttcaatatgatgtaccatttgaa
aaagagagttatgtccatcgtatgggacgtacaggacgcgcaggtcaacaaggtacagcg
attctattatctagtccgaatgaaaagcgttacgtacaagagattgaagagtatattgag
aaaaccattccagttgaaaaagcaccgactactgaagaagtagctgaaaaccaagctgcc
tttgaagaaaagatgaatacacgaccagaacgtaaagtgatgaagagtgagcaattgaat
gcacacattacgaaattgtactttaatggtggtaaaaagaagaaaattcgcgcagttgat
tttgtaggaaccattgcaaaaattgacggtgtgacagccgatgatattggcattattaca
attgaagatgcatgtagttttgttgagattttaaatggcaaaggaacactcgttttaaaa
gaaatgcaaaatcgtacagttaaaaataaaaaattaaaagtacacgttgcgaaaaaagca
taa
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