Kurthia sp. 11kri321: ASO14_31
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Entry
ASO14_31 CDS
T04250
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kur
Kurthia sp. 11kri321
Pathway
kur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASO14_31 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kur03021
]
ASO14_31 (rpoC)
03400 DNA repair and recombination proteins [BR:
kur03400
]
ASO14_31 (rpoC)
Enzymes [BR:
kur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASO14_31 (rpoC)
Transcription machinery [BR:
kur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASO14_31 (rpoC)
DNA repair and recombination proteins [BR:
kur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASO14_31 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AMA64164
LinkDB
All DBs
Position
30656..34255
Genome browser
AA seq
1199 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAASVSHIWYFKGIPSRMGLILDM
SPRALEEVIYFASYVVIDSADTPLEKKQLLSEKEYRAYREKFGSTFKASMGAEAIKDLLR
EIDLDKETEMLKEELKTAQGQRRTRAIKRLEVVESFRHSGNRPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKG
MAIELFKPFLMKELVERGLAHNIKSAKRKIERMHEDVWDVLEEIIREHPVLLNRAPTLHR
LGIQAFEPTLIEGKAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKGAPGEGTVFTDAEEVMVAYQNTEVHLHTRVAIK
ASSLNNKTFTEEQNGKLLVTTVGKIIFNEILDENFPFINEPSNDNLLETPDHFFLPTNTN
VKEYFENTDVVKPFTKKFLGNVIAEVFARYHITETSVMLDRMKDLGFKYSTKAGISIGIS
DIIVLPDKGEILHHAQEQVDKVQKQFRRGLITEEERYDRVISFWGAAKDEIQARLMKSLP
AENPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFISTH
GARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLTITSLKEGSEIIEALDE
RIIGRYAKKTIRHPETEEVIVARNELITQELARVIIDAGIEEVTIRSAFTCNTRHGVCKK
CYGMNLATGDKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRIQEIFE
ARNPKGQAVISEITGVVSDIEEIREGQKEITVTSPIESRKYLAPYNARLKVQVNDEVVHG
QVLTEGSIDPKQLIKVTDVSTVEEYLLKEVQKVYRMQGVEIGDKHIEVMVRQMLRKVRVI
EAGDTDLLPGSLLDVHQFYDANKTVLKEGKLPATCTPVILGITKASLETESFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVILGKLIPAGTGMQRYRQIQIAGEDEQKSEEAVSAE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgttaataattttgagtatatgaaaatcggtttagcttcaccagataaaatc
cgctcatggtcttatggagaagtaaaaaaacctgaaacaatcaactaccgcacactaaaa
ccagaaaaagatggtttattctgtgagcgtattttcggacctacaaaggactgggaatgt
cattgtggtaaatacaaacgcgttcgttataaaggcgtagtttgtgaccgttgtggcgta
gaagtaacacgtgctaaagttcgtcgtgaacgtatgggtcacatcgaattagcagcatct
gtatcacacatttggtactttaaaggtattccatctcgtatgggtctaattttagacatg
tcacctcgtgcactagaagaagttatctactttgcttcttacgtagtaatcgattcagct
gatacacctttagagaaaaaacaattactttctgaaaaagagtatcgtgcttatcgtgaa
aagttcggttcaacattcaaagcatcaatgggtgctgaagcgattaaagaccttttacgt
gaaatcgatcttgataaagaaacagaaatgttaaaagaagaattaaaaactgctcaaggt
caacgccgtacacgtgcgattaaacgtcttgaggtagttgaatcgttccgtcactcaggt
aaccgtcctgaatggatgattttagatgtactacctgtaattccaccagaattacgtcca
atggtacaacttgatggtggtcgttttgcgacttcagatttaaacgatttatatcgtcgt
gtaatcaaccgtaacaaccgtttaaaacgtttattagaccttggtgctcctggcatcatc
gtacaaaacgaaaaacgtatgttacaagaagcggtagatgcattaatcgataatggtcgt
cgtggccgtcctgttacaggtcctggtaaccgtccattaaaatcactttcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactactctggt
cgttcagtaatcgtagttggtccatctttaaaaatgtaccaatgtggtttaccaaaaggt
atggcaatcgagctattcaaacctttcctaatgaaagaattagttgagcgtggtttagcg
cacaacattaaatctgcaaaacgtaaaattgaacgtatgcatgaagatgtatgggatgtt
ttagaagaaatcattcgcgagcacccagtattactaaaccgagcgccaacgcttcaccgt
ttaggtatccaagcattcgaaccaacattaattgaaggtaaagcgattcgtcttcatccg
ttagtatgtacagcttacaatgctgacttcgacggtgaccaaatggcggtccatgtacca
ctttcagcagaagcgcaagcagaagctcgtctattaatgttagctgctcaaaacatcttg
aaccctaaagatggtaagccagttgtaacgccttctcaagatatggtattaggtaactac
tacctaactttagaacgtaaaggtgcacctggtgaaggtacagtatttacagatgctgaa
gaagtaatggtagcttaccaaaacactgaagtacatctgcatacacgtgtagcaattaaa
gcatcatctttaaataataaaacatttacagaagaacagaatggtaaactattagttaca
actgttggtaaaattattttcaacgaaattcttgatgagaacttcccgttcattaatgaa
ccatcaaatgataacttattagaaacaccagatcacttcttcttaccaacgaatacaaat
gtaaaagaatacttcgaaaatacagacgtagtaaaaccatttacaaagaaattcttaggt
aatgttattgcggaagtctttgcacgttatcatattacagaaacatctgttatgttagac
cgtatgaaagacttaggtttcaaatattctactaaagctggtatttcaatcggtatctca
gatatcatcgtattaccagacaaaggtgaaattttacatcatgcgcaagaacaagtagat
aaagtacaaaaacaattccgtcgtggtttaatcacagaagaagagcgttatgatcgcgtt
atttcattctggggtgctgcaaaagacgaaattcaagcacgtctgatgaaatctttacca
gctgaaaacccaatcttcatgatgagtgactctggtgcccgtggtaacgcatctaacttt
acacagttagctggtatgcgtggtctgatggcaaacccatctggtcgtatcatcgagtta
ccaatcaaatcatcattccgtgaaggtttaacagtattagagtacttcatctcgactcat
ggtgcgcgtaaaggtcttgccgatacagcacttaaaacagccgattcaggttaccttact
cgtcgtctagttgacgtagcgcaagatgtaatcgtacgtgaagatgattgcggtactgac
cgtggtttaacaattacttcattaaaagagggttctgaaattatcgaagcattagacgag
cgtattatcggtcgttatgcgaagaaaacaattcgtcacccagaaacagaagaagtaatc
gttgcgcgtaacgaattaattacgcaagagttagctcgcgtaattattgatgctggaatc
gaagaagttacaattcgttctgcatttacatgtaacacacgtcacggcgtatgtaaaaaa
tgttacggtatgaacttagctacaggagataaagttgaagtgggtgaagcggttggtaca
atcgcagctcaatcaatcggtgagccaggtacacagttaacaatgcgtacattccatact
ggtggggttgccggtgccgatatcacacaaggtcttcctcgtatccaagagatttttgaa
gcacgtaatccaaaaggtcaagcagtaatcagtgaaatcactggtgttgtttctgatatt
gaggaaattcgtgaaggtcaaaaagaaattacagtaacaagcccaattgaatcacgtaaa
tatttagcaccatacaatgcacgtttaaaagtacaagtaaacgatgaagttgttcatggt
caagtattaacagagggttcaattgatccaaaacaattaatcaaagtaacagatgtttca
actgtagaagaatatctattaaaagaagtacaaaaagtttaccgtatgcaaggggtagaa
attggcgataaacacattgaagtaatggttcgtcaaatgctacgcaaagtacgcgtaatc
gaagctggtgatactgatttattacctggttcacttctagatgttcaccaattctatgat
gcaaataaaactgttcttaaagaaggtaaactacctgctacatgtacaccagtgattctt
ggtattacaaaagcatcacttgaaacagaatcattcttatctgctgcatcattccaagaa
acaactcgtgttcttacagatgctgcaatcaaaggaaaacgcgatgagttattaggactt
aaagagaacgttatccttggtaagttgattcctgctggtacaggtatgcaacgctaccgt
caaatccaaattgctggtgaagacgagcaaaaatcagaagaagcagtttctgctgaataa
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integrated database retrieval system
