Kushneria konosiri: B9G99_02625
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Entry
B9G99_02625 CDS
T04839
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kus
Kushneria konosiri
Pathway
kus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9G99_02625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kus03021
]
B9G99_02625
03019 Messenger RNA biogenesis [BR:
kus03019
]
B9G99_02625
Transcription machinery [BR:
kus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B9G99_02625
Messenger RNA biogenesis [BR:
kus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B9G99_02625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
OB_RNB
Fungal_virus_P2_C
AAA
AAA_25
S1CSD-TOTE-2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ARS51924
UniProt:
A0A2Z2H3Y3
LinkDB
All DBs
Position
complement(561407..562666)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKTVPELLEVAQEMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSIAGKIRPPKEGERYFALLKVNQIN
FDRPENAKHKILFENLTPLFPQERLVMEIGNGSTEDITSRVIDLTSPIGKGQRGLIVSPP
KAGKTMMLQNIANSITRNNPECHMIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVYPALNI
RRSGTRREDLIASEDEMQRMWILRKLLNPMEDVAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaaccgaactcaagcaaaagactgttcccgagctgttggaagttgcccaggaa
atgggcatcgacaatctggctcgttcgcgcaagcaggacatcatcttcgccatcctcaaa
aagcacgccaaaagcggcgaggacatctatggcgatggcgtactcgaaatccttcaggat
ggctttggtttcctgcgcagcgccgactcttcctatctggccggtcccgacgacatctat
gtctcgccgtcccagattcgccgcttcaatcttcgcaagggcgactcgatcgccggcaag
attcgcccgcccaaggaaggggagcgttactttgcgctgctcaaggtcaaccagatcaac
tttgaccgccccgagaacgccaagcacaagatcctgtttgaaaacctgacgccgctgttc
cctcaggagcgtctggtcatggagatcggcaacggctccactgaagacatcacttctcgc
gtcattgacctgacctcgccgatcggcaagggacagcgcggcctgatcgtctcgccgccc
aaggcgggcaagacgatgatgctgcagaacatcgccaactcgatcacccgcaacaatccc
gaatgccacatgattgtgctgctgatcgatgagcgtcccgaggaagtgaccgaaatgtcg
cgcaccgtgcgcggtgaagtcgtggcctccacctttgatgagccgccggcccgccacgtg
caggtggccgaaatggtcatcgaaaaggccaagcgtctggtcgagcacaaaaaggacgtg
gtgatcctgctggattccattacccgtctggctcgtgcctacaacaccgtggtacccagc
tccggcaaggtgctgaccggtggtgtcgatgcccacgctcttgaaaagcccaagcgcttt
tttggggcggcccgtaacatcgaagagggcggtagcctgaccattctggccactgcgctg
gtggataccggctccaagatggacgaagtcatcttcgaggagttcaagggcaccggtaac
atggaagcgcatcttgaccgcaagctggccgagaagcgtgtttacccggcactcaacatc
cgccgctccggtacgcgtcgtgaagacctgatcgcctccgaggatgaaatgcagcgcatg
tggattctgcgcaagctgctcaatcccatggaagatgtggcggccaccgagttcctgatt
gatcgtctcaaggacaccaagaccaatctggaatttttcgaggccatgaagcgtcgctaa
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