Kushneria konosiri: B9G99_06775
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Entry
B9G99_06775 CDS
T04839
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kus
Kushneria konosiri
Pathway
kus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9G99_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kus03019
]
B9G99_06775
Enzymes [BR:
kus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9G99_06775
Messenger RNA biogenesis [BR:
kus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9G99_06775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Utp25_C
Herpes_capsid
Gag_p24
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARS52618
UniProt:
A0A2Z2H5R4
LinkDB
All DBs
Position
1448926..1450305
Genome browser
AA seq
459 aa
AA seq
DB search
MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPIL
ERLSRKPQGHKRPVRALILTPTRELAAQIGESVEKYGVHLKPRLKSDVVYGGVKVNPQIA
RLRDGVDVLVACPGRLLDLVNQKAVRLDQVETLVLDEADRMLDMGFIHDIKKILRLVPKQ
RQNLLFSATFSKEIRELAGTLLNNPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLI
THHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMV
ATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPDERGQLKQI
EKLIGRAIPVASAEGFDFSRAVPETPDEREQRPGGGQRRQGSGRNNNGGGARSGAGRSGS
GNRSRSGGGGNGGGNDEQARPARRRRRSSPRAADNSGNR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcccaacttgggctgtcgcccgagcttttgcgtgctcttgaagatgctggc
taccagacaccttcccccattcagtcgaaagccattccggcctgccttgaaggtcgcgat
gtgctggcggcggcccagaccggtaccggcaagaccgcaggtttcaccctgccgattctg
gagcgactgtcgcgcaagcctcagggacacaagcgtccggtacgcgccctgatcctgacc
ccgacccgcgaacttgccgcccagatcggcgagtcggtcgaaaaatacggcgttcacctc
aaaccgcgtctgaaaagcgatgtggtctacgggggcgtcaaggtcaatccgcagatcgcg
cgcctgcgcgatggcgtggatgtgctggtggcctgcccgggccgtctgctggatctggtc
aaccaaaaggccgtacggctggatcaggtcgaaaccctggtgctggatgaagccgaccgc
atgctggacatgggctttatccacgacatcaaaaagatcctgcggctggtaccgaagcag
cgtcagaacctgctgttttccgcgaccttctccaaggagatccgagagctcgccggaacg
cttttgaacaacccggtcagcatcgacgtggcgccgcgtaacaccgccgccgaaagcgtc
gaccagtcgatctacatggtcgaaaagccccagcgcatggcgcttttgacccatctgatc
acacaccatcagtggtcgcaggcgctggtctttacggcgaccaagcacatggccaaccgg
gtcacccagcatctgcagaaggctggcatcacggcggcggccattcacggcaacaagagc
cagaatgctcgtaccgcagcactgtccggcttcaagagcggggaagtgcaggtgatggtg
gccaccgatgtggcggcccgcggcatcgatatctccgaactgcccaatgtggtcaacttc
gaactgcccaagacaccggccgactatgtccaccgtatcggtcgtaccggccgtgccggt
gccagtggtcaggccgtgtcgctggtcatgcccgatgagcgtggccagctcaagcagatc
gaaaaactgatcggacgtgccattccggtcgccagcgctgaaggcttcgacttcagccgc
gcggtgccggaaaccccggatgagcgcgagcagcgcccgggtggcggtcagcgtcgtcag
ggcagcgggcgcaataataatggcggcggtgcgcgcagcggtgccggtcgtagtggctca
ggcaatcgctcacgcagcggaggcggcggtaatggcggcggcaacgatgagcaggcccgt
ccggcgcgtcgccgtcgtcgtagcagccctcgcgcggcggacaacagcggtaaccgctga
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