Kushneria konosiri: B9G99_07585
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Entry
B9G99_07585 CDS
T04839
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kus
Kushneria konosiri
Pathway
kus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9G99_07585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kus03019
]
B9G99_07585
03400 DNA repair and recombination proteins [BR:
kus03400
]
B9G99_07585
Enzymes [BR:
kus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9G99_07585
Messenger RNA biogenesis [BR:
kus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9G99_07585
DNA repair and recombination proteins [BR:
kus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B9G99_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
AAA_22
ResIII
HTH_Crp_2
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ARS52753
UniProt:
A0A2Z2H5U4
LinkDB
All DBs
Position
complement(1627441..1629438)
Genome browser
AA seq
665 aa
AA seq
DB search
MPTDATAAARHTLETVFGLEHFREGQGPVIERVLAGRSTAAIFATGAGKSLCYQLPALHL
PHLTLVISPLLALMQDQLAFLKSRGIAAASIDSTMDRDAVREVMTRARQGELKILMVSVE
RLRNERFRHFLHQIPISLMVIDEAHCISEWGHNFRPDYLRLPEYQREFNISQVLLLTATA
TPGVIEDMQRSFDIDQGDVITTGFYRPNLNLQVRPVAQPQRLEALIHWLAPQQVAGQKAP
TIIYVTLQQSAETVARALLARGLQARAYHAGLTSEVRDEIQQQFMRGEVPVIVATIAFGM
GIDKRNIRNVVHFDLPKSIENYSQEIGRAGRDGAPSTCLMLAGRDGLGVLENFTHGDTPE
REGIQRVLQEIQAAGQTPERQWPVVMNTLSRDSNIRALPLKTLLVRLEMMGVIAPRFTYL
AEYRLRYEIAPATLAARFEGERANFVQLIIDNIPIARTWGTVDFERLHQAGLAAGIDATR
TRVITALEYFQDKGWVVLEGKRMTDVLEVCQPDIDPPAMARELHEGFFHREQADIERLSS
MLSLFETDTCLSRRLALHFGDPRAPERCGHCSVCDGHVARLPASPMATRLEDINVDELAD
PFIERHQAHFQRLPTPERLAHFLCALAMPVFTPLKVRGLNAFGALEGYPYPQVRARAEQI
LEARG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgacgcgaccgccgccgcgcgccacaccctcgagacggttttcggcctcgag
cactttcgcgaaggccagggcccggtcatcgaacgggtgctggccggacgctccacggca
gccatctttgcgaccggcgccggcaaatcgctgtgctatcagctgccggcactgcacctg
ccgcacctgacactggtcatctcaccgctgctggcgctgatgcaggaccagctcgccttt
ttgaaatcccgcggcattgcggccgcaagcatcgactcgaccatggaccgcgacgccgtg
cgcgaggtgatgacgcgcgcccgccagggggagttgaagattttgatggtgtcggtcgag
cggctgcgcaacgaacgctttcgccactttctccaccagatcccgatttccctgatggtg
atcgacgaggcccactgcatctccgaatggggccacaactttcgaccggactatctacgc
ctgcccgaataccagcgcgagttcaatatctctcaggtgctgctgctgacggccacggcc
acgccaggcgtcatcgaggacatgcagcgaagctttgacattgatcagggcgatgtcatc
accaccggcttttatcgccccaacctgaaccttcaggtgcgaccggtggcacaaccgcag
cgtctcgaggcgctgatccactggctggcgccgcagcaggtggcaggtcaaaaagccccg
accatcatctatgtcaccctgcagcagagtgccgagaccgtggcacgggcgctgctggcg
cgcggccttcaggcacgcgcctaccatgccggcctgacctccgaggtgcgcgatgagatc
cagcagcagttcatgcgtggcgaggtgccggtcatcgtcgccaccattgccttcgggatg
ggtatcgacaagcgcaacattcgcaatgtcgtgcattttgatctgcccaaatcgatcgag
aactacagccaggagatcggccgtgccggccgtgacggtgcgccctcgacctgtttgatg
ctggccggccgtgatggactgggcgtgcttgaaaacttcacccacggcgacacgccggag
cgcgaaggtatccagcgggtactgcaagagattcaggccgcaggacaaacgccggagcgc
cagtggccggtggtgatgaatacgctctcgcgcgacagcaatattcgggcgttgccgctc
aagaccctgctggtacgccttgaaatgatgggtgtgatcgcgccgcgctttacctatctg
gccgaatatcgcctgcgttacgagatcgccccggcgacgctggccgccaggtttgaaggc
gagcgggcgaactttgtgcagctgatcatcgacaatatccccattgcccgcacctggggc
acggtggattttgaacgcctccatcaggcggggctggccgccgggatcgatgccacgcgt
acccgcgtcatcacggcccttgaatactttcaggacaagggctgggtggtgctggaaggc
aagcgcatgacggatgtccttgaggtctgtcagcccgacatcgacccacctgccatggcg
cgcgagctgcatgaggggtttttccatcgggagcaggccgatatcgagcgattatccagc
atgctctccctgtttgagaccgacacctgcctgtcacggcgtctggcgctgcactttggt
gatccacgcgcccccgagcggtgtggccactgctcggtctgcgacggccatgtcgcccga
ctgccggcctcgccgatggccacaaggcttgaggacatcaatgtcgatgagctggccgat
ccctttatcgaacgccatcaggcacactttcaacgtctgcccacgccggagcggctggcg
cattttctctgcgcgctggccatgccggtatttacgccactcaaggtgcgagggctgaac
gcgttcggggcactggagggctatccctatccgcaggtacgcgcccgggccgaacagatt
ctggaggcgcgaggctag
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