Kushneria konosiri: B9G99_11995
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Entry
B9G99_11995 CDS
T04839
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kus
Kushneria konosiri
Pathway
kus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B9G99_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kus03021
]
B9G99_11995
Transcription machinery [BR:
kus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B9G99_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Cwf_Cwc_15
CDC45
SDA1_dom
Motif
Other DBs
NCBI-ProteinID:
ARS53488
UniProt:
A0A2Z2H815
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All DBs
Position
2594366..2596228
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AA seq
620 aa
AA seq
DB search
MAGNTPQSRLKELIAQGKEQGFLTYAEVNDHLPEDIADPDQVEDIIGMINDMGINVVEEA
PDEDTLMMSDQSADESAAEEAVAALAAVESDVGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEEGTREVMSALASLPGAVDSILEAYDATQDEEAPGRLSDLFSGFIDPDEGVPGVAE
VEEPMPEIVADDSDDSDSDDDSDDDDSNEEDDTASEGGPDPELARVRFEQIREQNEQTKA
AIEAHGLSSSQARSEQARLAELFSPIKLVPRHFERLVGQLRLSVGQIREQEKTIMQLCVK
RGKVPRKTFIASFPGRESDASWIDDFIERNSKHASSIEPLRADIERAQRKIAFEEELALL
PVSELKDINRRLSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLM
KAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVSRQMLQE
MGREPTPEELGERLEMPEDKVRKVLKIAKEPISMETPIGDDDDSHLGDFIEDSTMVSPID
SATGEGLIEATRNVLGGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAK
ALRKLRHPSRSESLRSFIDE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaatacaccgcagtcacgtctgaaggagttgatcgcgcaaggcaaggaacag
gggtttcttacctacgcggaggtcaacgaccatctgcctgaggatattgcagatcctgat
caggtagaagacatcatcggcatgatcaacgacatgggtatcaacgtcgttgaagaagca
cccgatgaagatacgctgatgatgtcggatcagtctgctgacgaatctgccgccgaagaa
gctgtcgcagcgctggcggccgttgaaagtgacgttggccgcaccactgatccggttcgc
atgtacatgcgtgaaatgggtaccgtcgagcttttgacgcgcgaaggcgaaatcgagatc
gccaagcgtatcgaagagggtactcgtgaggtcatgtcggcgctggcaagcctcccgggc
gccgttgattcaatcctggaagcctacgacgcgactcaggatgaagaggcgccgggtcgt
ctttctgatctgttttcgggcttcatcgaccctgatgaaggcgtaccgggtgtggctgag
gtcgaagagcccatgcccgaaatcgtggctgacgacagtgatgacagcgacagcgacgac
gacagcgacgatgatgacagcaacgaggaggacgatactgcctccgagggcggtccggat
cccgagctggcccgcgttcgcttcgagcagatccgcgagcagaacgagcagaccaaggcg
gccattgaggcccatggcctgtcatcttctcaggcgcgcagtgaacaggcccgtctggca
gagctcttctcaccgatcaagctggtgccgcgccatttcgagcgtctcgtgggtcagctt
cgtctgagcgtgggtcagattcgcgagcaggaaaagaccatcatgcaactgtgcgtcaag
cgcggcaaggtgccccgcaagacgttcattgcctccttcccggggcgtgagtcggacgcg
agctggatcgatgatttcatcgagcgcaacagcaagcatgccagcagcattgagccgctg
cgtgccgacatcgagcgtgctcagcgcaagattgcctttgaagaagagctggcgcttttg
ccggtctccgagctcaaggacatcaaccgtcgcctgtcgatcggtgaagccaaggcgcgg
cgtgccaagaaggaaatggtggaagccaaccttcgactggtgatctcgattgccaagaag
tacaccaatcgtggcctgcagttcctggacctgattcaggaaggcaacatcggtctgatg
aaggccgtcgacaagttcgaatatcgtcgcggttacaagttctcgacctatgccacctgg
tggattcgtcaggccatcacacgctcgattgccgaccaggcgcgtaccattcgtattccg
gttcacatgatcgaaacgatcaacaagctcaaccgcgtttcgcgccagatgcttcaggaa
atgggacgcgagcccacgccggaagagctgggcgagcgtctcgagatgccggaagacaag
gttcgcaaggtgctcaagatcgccaaggagccgatctcgatggaaacgcccatcggtgat
gacgatgattctcacctgggcgattttatcgaggattccaccatggtgtccccgatcgat
tcagccaccggcgaaggtctgatcgaagccacgcgcaacgtgctgggcggcctgaccgca
cgcgaggcgaaggtgctgcgcatgcgctttggtattgatatgaacactgaccatacgctg
gaagaagtgggcaagcagtttgatgtgacccgcgagcgtattcgtcagatcgaggccaag
gcgctgcgcaagctgcgtcacccctcgcgttccgagtcactgcgctcctttatcgacgaa
taa
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