Kushneria konosiri: B9G99_12495
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Entry
B9G99_12495 CDS
T04839
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kus
Kushneria konosiri
Pathway
kus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9G99_12495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kus03019
]
B9G99_12495
03009 Ribosome biogenesis [BR:
kus03009
]
B9G99_12495
Enzymes [BR:
kus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B9G99_12495
Messenger RNA biogenesis [BR:
kus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B9G99_12495
Ribosome biogenesis [BR:
kus03009
]
Prokaryotic type
rRNA helicases
B9G99_12495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
AAA_30
CMS1
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ARS53576
UniProt:
A0A2Z2H9E0
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All DBs
Position
2703402..2705129
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AA seq
575 aa
AA seq
DB search
MTSTSVASPTFGDMALLPAVLESLVSLGYETPSPIQAQTIPSLLEGADLLGQAQTGTGKT
AAFALPLLSRLELDRREPQVLVLAPTRELAQQVAVAFSRYGQNIKGLEVVTLCGGQDYRE
QMRGLKSGGQIVVGTPGRVIDHLDRGSLSLTGLNALVLDEADEMLRMGFIDDVKRVLKDT
PTDAQRVFFSATLPPEISRIVSRYLVDPITVQIEARAATTTIQQRVCRVEGPAKIEALAR
IIEVEPVDAAIVFVRTRASCTTLVDQLVARGIAAAPLSGDLDQSLRERTVQRLKKGKVDV
LVATDVAARGLDVPRITHVINFDMPHDTEAYIHRIGRTGRAGREGTAIAFAGNREVRKIR
WLEQATGQKIDTMELPDEKTMRAHRDEKFKARAEAMLERGHEHQRAMVESLLEEGIDPID
LACVFASLARAGEPPIRSLPKSNPRSERPERGERSERGGERRPPRRRESGPSEGMTRYRL
AVGHRDNIKPGQLVGALANEGGIEGARIGRIDIRQTHSLVELPTSLPETVLAKMARARVG
GRQLEISKDAGRPEGGQSEGRSERPRRDDRRQQAS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacttccgttgcctcgccgactttcggtgacatggcgctgctgcctgctgtt
ctcgaatctcttgtatctctgggctacgaaacgccgtctcccattcaggcgcagaccatt
ccatcgcttctggaaggcgctgaccttttgggtcaggcacaaaccggtaccggcaaaacg
gcagcctttgccttgccgctgctctccaggctggaactggatcgtcgcgaaccccaggtg
ctggtactggcaccgactcgcgagctggcccagcaggttgccgtggcttttagccgctac
ggccagaacatcaagggccttgaggtcgtcacgctgtgcggtggccaggactaccgtgaa
cagatgcgcggcctgaaaagcggcggtcagattgtcgtgggtacgccgggtcgcgtcatc
gaccacctggatcgtggttctctgagcctgaccggcctgaacgcgctggtgcttgatgaa
gccgacgaaatgcttcgcatggggttcattgatgacgtcaagcgcgttctcaaggacact
ccgaccgatgcgcagcgcgtgttcttctccgccacactgccgccggaaatttcacgtatc
gtcagccgctatctggttgacccgatcacggttcagatcgaggcgcgtgccgccacgacc
accattcagcagcgcgtctgccgcgtggaaggcccggccaagatcgaagcgctggcacgt
attatcgaagtcgagccggttgatgcggccatcgtcttcgtgcgtacccgcgcctcctgc
accacgctggtggaccagctggtcgcccgtggtatcgccgcggcgccgctgtccggtgat
ctggaccagagcctgcgtgagcgcacggttcagcgcctgaaaaagggcaaggtcgatgtg
ctggtcgccaccgatgtggccgcacgtggcctcgacgtgccgcgtattacgcacgtcatc
aactttgatatgccccacgataccgaagcctatatccaccgtatcggtcgtaccggccgt
gccggtcgcgaaggcacggccattgcctttgccggtaatcgtgaagtgcgcaagattcgc
tggctcgagcaggccaccggtcagaaaatcgataccatggaacttcccgatgagaagacc
atgcgtgcgcatcgtgacgagaagttcaaggcccgtgcagaggccatgctcgagcgcggt
catgagcaccagcgtgcgatggtggagtcactgctggaagaagggatcgacccgatcgat
ctggcctgtgtctttgcaagccttgcccgtgccggcgagccgccgattcgttcattgccg
aaatccaacccgcgcagcgagcgtcccgagcgtggtgaacgctccgagcgtggcggtgag
cgtcgtccgccgcgtcgtcgcgaaagcggcccgagtgaaggcatgacccgttatcgtctg
gccgttggtcatcgcgacaacatcaagccgggacagctggtcggcgctctggccaacgaa
ggcggtatcgaaggcgcccgtatcggccgcatcgacattcgccagacccatagcctggtc
gagctgcctaccagcctgcccgagaccgtgctggccaagatggcgcgtgctcgcgtcggt
ggtcgtcagctggaaatcagcaaggatgccggacgtcccgagggcggccagagcgaaggt
cgcagcgagcgtccgcgtcgtgatgaccgtcgccagcaggcttcctga
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