Kushneria konosiri: B9G99_15510
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Entry
B9G99_15510 CDS
T04839
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
kus
Kushneria konosiri
Pathway
kus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9G99_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kus03019
]
B9G99_15510
Messenger RNA biogenesis [BR:
kus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9G99_15510
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ARS54116
UniProt:
A0A2Z2HB09
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Position
3352155..3353801
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AA seq
548 aa
AA seq
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MDQTRVQVRPRRRSEIEILPLGGCGEIGMNLMLYGFQSRWLMVDCGMALRQDLHDTPLQI
PDISSLATLGIRPEAIVITHGHEDHLGALGWLWPRLGCPVYATPLAAGIARQKLVEQGLA
TDAIRTFAPGDHFNAGPFSVQSINVAHSIPESVSLLLEVDRHRILHTGDWKIDPHPVLGA
KTLEQDFARLAPVDLVVGDSTNAMVENHSHSESEVAATLEKLMEGCKGRVVVSCFASNLA
RILATGRAAKRHHRRIALLGRAMEKMVRLGRELGYLNDFPDIVPLSDIGYLPPEEILILA
TGSQGEPRAALSRLAVNQHPALEIEAGDSIIFSSRAIPGNESAVMRLQQAFTQRGAHVYS
DEAHPGLHASGHPGRDELLSMYRWIRPSHLLPVHGETDHQKAHCEIAGTLGIESSILPVN
GQWLRWNGKRMTLESTLTLSPVIISQRKRARKSSNRQNDTVIVLPVIYQADTAQWQRVGR
MLIDSQIETFVDEDTLGDWVDITLEGMTARSSRELAHLLEVLANRWLNEQLRQSSRVMID
VVDTTLNE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacacgcgtacaagttcgcccccgtcgccgctctgagattgaaatattaccg
cttggcggctgcggtgaaatcggcatgaacctgatgctttacggctttcagtctcgatgg
ctgatggtcgattgtgggatggccctgcgccaggatctccacgacacccccttgcagatt
cctgatatctcgtcgctggcaacgcttggcatccgcccggaagccattgtcatcactcat
ggacatgaggatcatctcggggccctgggatggctatggccacgcctgggatgccctgta
tatgcaacaccactggcggcaggtattgcgcgtcaaaagcttgtagagcagggtctggcc
accgacgccatacgcacctttgcaccaggggatcatttcaatgcggggcccttctccgta
caaagcatcaatgtcgcccactccataccggaaagcgtgtcgctactgctcgaagtagat
cgacaccgaatcctgcataccggcgattggaaaattgatcctcaccctgtattgggcgct
aaaaccctcgagcaggactttgcccgccttgcccctgtcgatcttgtcgtgggtgactct
accaacgccatggtggagaatcactcacacagcgaaagcgaggtagcagcaacccttgag
aagctcatggaaggctgcaagggccgagtcgttgtcagctgttttgccagtaacctggcg
cgtattctggcgacagggcgagcggcaaaacgtcatcatcgacgcattgccctgctcggc
agagccatggaaaaaatggtgcgtctgggacgcgaactgggatacctgaacgattttcca
gatatcgtgccgctgtctgatatcggttatctcccgcctgaggaaattctgatactggcc
acgggcagtcagggggaacctcgcgccgccctctcccgcctggcagtcaatcaacatcca
gccctcgaaatcgaagctggggactccatcatcttttcatcgcgcgccatcccgggtaat
gaaagcgccgttatgcgtctgcaacaggcttttacgcaaagaggcgctcacgtctatagc
gatgaggcgcaccccggactgcatgcatcaggtcacccaggccgagatgaattgcttagc
atgtatcggtggatcagaccttcacatctgttgccggttcatggggagactgatcatcaa
aaggctcactgtgaaatcgcaggaacgcttggcatcgaaagctcaatacttcccgttaac
ggacagtggctacgctggaatggcaaacgcatgacactggaaagcactttaacgctttct
ccagtcattatttcgcagcgcaaaagagccagaaagtcttcaaatcggcaaaacgatacc
gtcattgtacttccggtcatttatcaggcagacactgcacagtggcaacgcgtaggcaga
atgctcattgacagtcagatcgaaactttcgtggatgaagacacccttggggattgggta
gacattacgctggaaggaatgaccgctcgctcttcaagggaactggcacatttgctggag
gttctcgccaatcgatggctcaatgagcaacttaggcaatcttcaagagtcatgatcgat
gtcgtcgacacaacactgaacgaatag
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