Kutzneria sp. CA-103260: JJ691_84050
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Entry
JJ691_84050 CDS
T08943
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kut
Kutzneria sp. CA-103260
Pathway
kut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JJ691_84050 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kut03021
]
JJ691_84050 (rpoC)
03400 DNA repair and recombination proteins [BR:
kut03400
]
JJ691_84050 (rpoC)
Enzymes [BR:
kut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JJ691_84050 (rpoC)
Transcription machinery [BR:
kut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JJ691_84050 (rpoC)
DNA repair and recombination proteins [BR:
kut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JJ691_84050 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QUQ70622
UniProt:
A0AAT9M505
LinkDB
All DBs
Position
9424964..9428863
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAEVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVNTELRHNDLPTLESEMQVERKRVENRRDADVEARAQKLEAD
LAELEAEGAKSDVRRKVKEGGEREMRQLRDRAQRELDRLDEIWSTFTKLDIKQLIADELL
YRELIDRYGDYFTGSMGAESIQQLAKDFDVDAEADILRETIRSGKGQKKLRALKRLKVVA
AFQQTRNSPMGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PAVWDVLEEVITEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFHLTRIKPEAEGAGR
AFSSVAEAIMAFDRKVIGLQAPIKVRLNDQVPPRGQEPEEWEPGQPWLAETTLGRVLFNE
LLPADYPFMNEEMPKKRQGEIVNDLAERYPMVTVARTLDKLKDAGFYWATRSGVTVAISD
VLVPEEKKAILNEYEGKAEAVEKRYQRGQLSHAERNNELVKVWQSATDEVAKLMETAFPE
DNSIRVIVKSGAAGNMTQVRSLAGMRGLVTNPKGEYIPRPIKNSFREGLSVLEYFIATHG
ARKGLADTALKTADSGYLTRRLVDVSQDVIIREIDCGTNRGVTMTVGEKVGDKVVMHEYA
RTSVYARSLAEDITDADGNVVLNRGADLGDPALDTLIRVGTIRVKVRSVLTCESAVGVCA
SCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGATGADDITQGLPRVQEL
FEARVPKGKAPIADVDGRVRIEDGDRFWKITLVPDDGSEEIIFDKLSKRQRLAITPDGPL
QDGDHVSVGQQLLEGTPDPHEVLRVMGPREAQLHLVNEVQKVYRSQGVSIHDKHIEVIVR
QMLRRVIIIDSGATEFLPGAPIERSEFEQSNRRVVAEGGEPASGRPVLMGITKASLATES
WLSAASFQETTRVLTDAAINGKSDKLIGLKENVIIGKLIPAGTGINRYRNIQVQPTEEAR
AAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDYR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccgcatcggcctcgccacggccgacgacatc
cgccagtggtcctacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccgaggtgcgccgcgagcggatgggccacatcgaactggccgcaccc
gtcacccacatctggtacttcaagggcgtccccagccggttgggctacctgctcgacctg
gcccccaaggacctcgagaagatcatctacttcgccgcctacgtgatcaccgcggtgaac
accgagctgcgccacaacgacctgcccacgctcgagagcgagatgcaggtcgagcgcaag
cgcgtggagaaccgccgcgacgccgacgtcgaggcccgggcccagaagctcgaggccgac
ctggccgagctcgaggccgagggcgccaagagcgacgtgcgccgcaaggtcaaggagggc
ggcgagcgggagatgcgccagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggagcaccttcaccaagctcgacatcaagcagctgatcgccgacgagctgctc
taccgcgagctgatcgaccgctacggcgactacttcaccggctcgatgggcgccgagtcc
atccagcagctggccaaggacttcgacgtcgacgccgaggccgacatcctgcgggagacc
atccgcagcggcaagggccagaagaagctgcgcgcgctcaagcggctcaaggtcgtggcg
gcgttccagcagacccgcaactcgcccatgggcatggtgctcgactgcatcccggtgatc
ccgccggacctgcggccgatggtccagctcgacggtggccggttcgccacctccgacctg
aacgacctgtaccgccgggtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtcaccggcccgggcaaccgcccgctcaag
tcgctgtccgacctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggcgatggccctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtcggccaagcgcatggtggagcgggcccgg
ccggccgtgtgggacgtgctggaagaggtcatcaccgagcacccggtgatgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgtgaggccttcaacgccgacttcgacggcgaccag
atggcggtgcacctgccgctgtcggccgaggcccaggccgaggcccggatcctgatgctg
tccagcaacaacatcctctcgcccgcctccgggcggccgctggcgatgccgcgtctggac
atggtcacgggtctgttccacctgacccggatcaagccggaggccgagggcgcgggccgc
gccttctcctcggtggccgaggcgatcatggcgttcgaccgcaaggtgatcgggctgcag
gcgccgatcaaggtgcggctcaacgaccaggtgccgccgcggggccaggagcccgaggag
tgggagcccggccagccgtggctggccgagaccaccctgggccgggtgctgttcaacgag
ctgctgccggcggactacccgttcatgaacgaggagatgccgaagaagcggcagggtgag
atcgtcaacgacctcgccgagcggtacccgatggtcaccgtggcgcggacgctggacaag
ctcaaggacgccggcttctactgggccacccgctcgggtgtcacggtcgccatctccgac
gtgctcgtgcccgaggagaagaaggccatcctcaacgagtacgagggcaaggccgaggcc
gtggagaagcgctaccagcgtggtcagctctcccacgccgagcgcaacaacgagctggtc
aaggtgtggcagtcggcgaccgacgaggtcgccaagctgatggagaccgcgttccccgag
gacaactccatccgggtcatcgtcaagtccggcgcggccggcaacatgacgcaggtccgg
tcgctggccggcatgcgtggtctggtgaccaacccgaagggtgagtacatcccgcggccg
atcaagaactcgttccgcgagggcctgtcggttctggagtacttcatcgccacgcacggc
gcccgcaagggtctggccgacaccgcgctgaagaccgccgactcgggttacctgacccgt
cgtctggtggacgtctcgcaggacgtgatcatccgtgagatcgactgcggcaccaaccgc
ggcgtcacgatgaccgtcggcgagaaggtcggcgacaaggtcgtgatgcacgagtacgcg
cgcaccagcgtgtacgcgcgctcgctggccgaggacatcaccgacgcggacggcaacgtg
gtgctcaaccgcggcgccgacctgggcgaccccgccctggacacgctgatccgggtgggc
accatccgggtcaaggtccgctcggtgctgacctgtgagtcggccgtcggtgtgtgcgcc
agctgctacggccgctcgatggccaccggcaagctggtggacgtcggcgaggcggtgggc
atcgtggccgcccagtcgatcggtgagccgggcacccagctgaccatgcgtaccttccac
cagggtggcgccaccggcgcggacgacatcacccagggtctgccgcgtgtccaggagctc
ttcgaggcccgcgtgcccaagggcaaggcaccgatcgccgacgtcgacggccgcgtgcgg
atcgaggacggcgaccggttctggaagatcaccctggtgccggacgacggcagcgaggag
atcatcttcgacaagctgtccaagcgtcagcgcctggcgatcaccccggacggcccgctg
caggacggcgaccacgtgtccgtcggccagcagctgctggagggcaccccggacccgcac
gaggtgctgcgcgtgatgggtccccgcgaggcccagctgcacctggtcaacgaggtgcag
aaggtgtaccggtcgcagggtgtgtccatccacgacaagcacatcgaggtgatcgtgcgg
cagatgctccgccgcgtgatcatcatcgactcgggcgccacggagttcctgccgggcgcg
ccgatcgagcgcagcgagttcgagcagtcgaaccgccgcgtggtggccgagggcggcgag
ccggcctcgggtcgtccggtgctgatgggtatcaccaaggcctcgctggcgacggagtcg
tggctctcggcggcctccttccaggagaccacccgggtgctcaccgacgccgccatcaac
ggcaagagcgacaagctcatcggcctgaaggagaacgtcatcatcggtaagttgatcccg
gctggcacgggcatcaaccgctaccgcaacatccaggtgcagccgacggaggaggcgcgg
gccgcggcctacgcgatcccgtcctacgacgacggctactacacgccggacgtcttcggc
accggcacgggtgcggcggttccgctggacgactacgacttcggtcgcgactaccgttga
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