Kushneria phosphatilytica: FY550_00815
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Entry
FY550_00815 CDS
T06200
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kuy
Kushneria phosphatilytica
Pathway
kuy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY550_00815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kuy03019
]
FY550_00815
03400 DNA repair and recombination proteins [BR:
kuy03400
]
FY550_00815
Enzymes [BR:
kuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FY550_00815
Messenger RNA biogenesis [BR:
kuy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FY550_00815
DNA repair and recombination proteins [BR:
kuy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FY550_00815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
SelB-wing_3
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QEL12651
UniProt:
A0A1S1NRG1
LinkDB
All DBs
Position
complement(175447..177435)
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AA seq
662 aa
AA seq
DB search
MHHTLKRVFGFDDFRGGQQAVVERVIEGRSTAAIFATGAGKSLCYQLPALHLPHLTLVVS
PLLALMQDQLAFLKRHGVAAATIDSSMERDDVREVMRRARSGELKILMVSVERLRNERFR
RFLEQVAISLLVIDEAHCISEWGHNFRPDYLRLPDYQREFGIPQALLLTATATPAVIRDM
QERFAIAPDDVITTGFYRHNLELLVEPVASDDRPNALYHWLAPRQQPGAEEPTIVYVTLQ
QTAENLARQLSQQGLRARAYHAGLDGETRDTLQQQFMSGEVPCIVATIAFGMGIDKRDIR
NVVHFDLPKSIENYSQEIGRAGRDGEHSRCLVLANRDALGVLENFVYGDTPEPGGIRYVL
ESIRQAGHSEMRQWPVVLNTLSRESNIRVLPLKTLLVQLEMRGLIRPQLAYLAEYRLQYL
IDSSDLVARFEGERARFVTLLVEEIPVARRWGTVDFERLYQAGQRERIDASRSRVISALE
YFQQQGWLVLEGKRLTDVFEVLTPEFDIEAQAAALSDHFQAKERAEIERLNTVVTLLESE
YCLTRRLAEYFGDDHFTRADTPDRCGHCSVCFGRIARLSAPASLPALTSADFSRFAQPFI
ERHREQLATGPGAIRITRFLCGLSMPIFTPLKARQLTGFARLEQYPYSDVYRWVEQQSMH
HD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atacaccacacgctcaaacgcgttttcgggtttgatgacttccgtggcggccagcaggcg
gtggtggaacgtgttatcgagggtcggtcgacggccgccatcttcgccaccggcgccggc
aagtcgctctgctatcaactgccagccctgcacctgccgcatctgacgctggtggtctca
ccgctgctggcactgatgcaggatcagctggcgttcctcaagcgtcacggcgtggcggcc
gccaccatagactcttccatggaacgcgatgacgtgcgcgaggtcatgcgtcgcgcccga
tcgggcgagctgaagatcctgatggtatcggtggagcgactgcgcaacgaacgcttccgc
cgctttctcgaacaggtggccatttcgctgctggtgatcgacgaggcgcactgtatttcc
gagtggggacacaactttcgccccgactacctgcgcctgccggactatcagcgcgaattc
ggtattcctcaggcgctactgctgaccgccactgcgacgcctgcggtcattcgggacatg
caggaacgttttgccatcgcgcctgacgatgtcatcaccaccggcttttatcgtcacaat
ctcgagctgctggtcgaaccggtcgcaagcgatgacaggccgaatgccctgtaccactgg
ctcgccccccgccagcagccgggtgcggaagagcccaccattgtctatgtcaccctgcag
cagaccgccgagaacctcgcccgccagctgtcgcaacagggcctgcgggcgcgggcctat
cacgccgggcttgacggcgaaacgcgcgacaccctccagcagcagttcatgagtggcgag
gtgccctgcattgtcgccaccattgccttcggcatgggcatcgacaagcgcgatatccgt
aacgtggtgcatttcgatctacccaaatcgatcgagaactacagccaggaaatcggccgt
gccggacgtgatggtgaacactcacgctgtctggttctggccaatcgtgacgccctcggg
gtgctggagaatttcgtctacggcgataccccggagcccggtggcatccgctacgtgctc
gagtcgatccggcaggcgggccacagcgaaatgcgtcagtggccggtggtactcaacacg
ctctcgcgggagagcaatattcgtgtgctgccgctcaagacactgctggtacagctggag
atgcgcgggttgatcaggccacagctggcttatctggccgagtatcggctgcagtatctg
atcgactcaagcgatctggtcgcccgtttcgagggcgagcgagcgcgattcgtgacattg
ctggtggaggagatcccggtcgcgcgacgctggggcacggtggatttcgagcgcctctac
caggccggacagcgcgagcgcatcgacgcctcgcgctcgcgggtgatcagtgcgctggaa
tactttcagcagcagggctggctggtactggagggcaagcgtctgaccgatgtcttcgag
gtactcacgcccgagttcgatatcgaggcgcaggccgcggcactgagtgatcactttcag
gcgaaggagcgcgccgagatcgaacggctgaacactgtggtcacgctgctggagagcgag
tattgcctgacgaggcgtctggccgaatacttcggcgatgaccatttcacgcgcgccgat
acgccggatcgctgtggccactgttcagtctgtttcggtcgtatcgctcgcctgtcggca
ccggcgtccctgccggcgctgacgtctgcggatttcagccgtttcgcgcagccgtttatc
gagcgtcatcgcgagcagctggcgaccgggccaggggcgattcgaatcacgcgctttctc
tgcgggctgtcgatgccgatcttcacgccgctgaaggcccgtcagctgacgggctttgcc
cggctcgagcagtatccctacagcgatgtttatcgctgggtcgaacagcaatcgatgcac
catgactga
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