Kushneria phosphatilytica: FY550_05995
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Entry
FY550_05995 CDS
T06200
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kuy
Kushneria phosphatilytica
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kuy03016
]
FY550_05995
Enzymes [BR:
kuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FY550_05995
Transfer RNA biogenesis [BR:
kuy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FY550_05995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1717
Motif
Other DBs
NCBI-ProteinID:
QEL12754
UniProt:
A0A5C1A3S7
LinkDB
All DBs
Position
complement(1342177..1344120)
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AA seq
647 aa
AA seq
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MLQNNSALAQLKQQIRDNTPRATGVVKGTEKGFGFLETDDGQSLFIPPPAMKQVMHGDRI
EAVIHEADERKSVAPDSLIEAGLDRFIGRVQKREGKLSVVPDHPSIKTAIRARVHRQLDE
AAMNEGDWVVARLLRHPLRADDRSFFCQIDEVIATSSDPSVPWRVTLARHALEQASPSGA
EQWPQLEESLTRTDLSDQPFFTIDSASTTDMDDALYIEARSEGGYRLTVAIADPTAYIAV
DDAVDREARQRAFTVYLPGRNVTMLPEALADDLCSLKQDADRLALAATLEVDSDGTITET
RFFTATVRSHARLTYEQVSDWLEAQGEWQPESESIAQQLRQLEGFTRARQQWREQHALVF
PDRPDYVFKLDEAGNVLDIVAEPRRIAHRMIEEAMIAANLSCADFLKRHVGHGIYNVHQG
FTEERADQAVQLLAAQSIEASREQLMGVEGYRTLRRTLDTHNNAWLDARLRRLQGFAGVS
SEPGPHFGMGVPAYATWTSPIRKYGDMFNHRLIKQVLREETPSTAATETLTEHLGERRRL
NRLAERDVKDWLYVRYLSEAAREGRGFAAEIVDIRRGGLRVRLAANGASAFVPASTLTSD
RDQLSIDEREGLIHIGGELRYRLGDPLNVVLSEAREETRSLVARPAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaataactccgcgcttgctcaactcaagcaacagattcgtgacaacacgccg
cgtgctaccggcgtggtcaagggtaccgagaaaggcttcggctttcttgaaaccgacgac
ggccagtcgctgttcattccaccgccggcgatgaagcaggtcatgcatggtgaccgcatt
gaagcggtgattcatgaagccgacgagcgcaagagcgtggcccctgacagcctgatcgag
gccggtcttgatcgattcatcggtcgggttcaaaagcgcgaaggcaagctgtcggtggtt
cccgatcatccgtcgatcaaaactgccattcgtgcgcgggttcatcgccagctggatgaa
gcggccatgaacgaaggcgactgggtagtggcccgtttgttgcgccatccgctgcgcgcc
gatgatcgcagtttcttctgtcagatcgatgaagtcattgccacttcttcggacccctcg
gttccctggcgggtcacactggcacgacatgcactggagcaggcctctccgagtggtgcc
gagcagtggcctcaactcgaggagtcgctgacgcgcaccgacctgagcgatcagccgttc
ttcaccattgacagcgcctccactaccgatatggacgatgcgctgtatatcgaggcacgc
agtgaaggtgggtaccggctaaccgtggcgatcgccgacccaacggcttatattgccgtc
gacgatgccgttgatcgtgaagctcgtcagcgcgccttcacggtctatcttccggggcga
aacgttaccatgctccccgaggcactggctgacgatctctgctcgctgaaacaggatgcc
gaccgtctggctctggccgccacgctggaggtcgatagtgatggcaccatcacagagact
cgctttttcaccgccacggtgcgctcccatgcgcggttgacctatgaacaggtctccgac
tggctggaagctcagggagaatggcagcccgagtcagagagcattgctcaacagctgcgc
cagcttgaaggttttacccgagcgcgtcagcagtggcgcgagcagcatgcgctggtcttc
cccgatcggcccgactacgtcttcaagcttgatgaggcgggtaatgtgctcgatatcgtc
gcggagccaagacgcattgctcatcgcatgatcgaagaggcgatgattgcggccaatctc
agctgtgccgatttcctgaagcgtcatgtcggccatggtatctacaacgttcatcaggga
tttaccgaggagcgcgccgatcaggctgttcagctgctcgccgcccagtccatcgaggcc
tcccgcgaacagctgatgggcgttgagggttaccgtaccctgcgccgtactctggatacg
cataacaatgcctggctggatgctcgcttgcgacgcctgcagggttttgccggtgtatcc
agtgaacccgggccacatttcggcatgggggtgcccgcatatgccacctggacatcgccg
atccgaaaatacggtgacatgttcaaccaccgcctgatcaagcaggtattgcgcgaagaa
accccatcgactgcagccactgaaaccctgaccgaacaccttggcgagcgccgacgcctc
aatcgtctcgccgaacgcgacgtcaaggactggctctatgttcgttatctgagcgaagcc
gctcgcgagggtcgtgggttcgctgccgaaatcgtcgatattcgacgcggcggactgaga
gtgcgcctggcggccaatggtgcttccgccttcgtgcctgcatcaaccttgaccagtgac
cgggaccagctgtcgatcgatgaacgtgaaggcctgatccatatcggcggagaactgcgc
tatcgtctcggtgacccactcaatgtggtactgtccgaggctcgcgaggaaacacgctcg
ctggtcgcccgtccggccgaataa
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