Kushneria phosphatilytica: FY550_07350
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Entry
FY550_07350 CDS
T06200
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kuy
Kushneria phosphatilytica
Pathway
kuy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY550_07350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kuy03019
]
FY550_07350
03009 Ribosome biogenesis [BR:
kuy03009
]
FY550_07350
Enzymes [BR:
kuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FY550_07350
Messenger RNA biogenesis [BR:
kuy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FY550_07350
Ribosome biogenesis [BR:
kuy03009
]
Prokaryotic type
rRNA processing factors
FY550_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QEL10960
UniProt:
A0A5C0ZWG9
LinkDB
All DBs
Position
complement(1610658..1613663)
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AA seq
1001 aa
AA seq
DB search
MKRMLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYRGRITRVEPSLEAAFVDF
GAERHGFLPLKEISREYFVRDPGQGGRPNIREVIRDGQEVIVQVDKEERGNKGAALTTFI
SLAGRFLVLMPNNPRAGGISRRIEGEERAELKEAMSGLEMPEGMGVIVRTAGIGRSSEEL
QWDLNYLVQIWETITEEAGKRSAPFLIYRESNVIIRAMRDYLRQDIGEVLIDDPTVYNEA
LAFVQQVMPTYQQKIKPYRDDVPLFSRFQIESQIETAYEREVKLPSGGSVVIDHTEALVS
IDINSSRATKGGDIEETALQTNLEAADEIARQLRLRDIGGLVVIDFIDMGPSRNQREVEN
RVRDALKIDRARVQIGRISRFGLMEMSRQRLRPSLGETSGVVCPRCNGQGTIRDVRSLSL
SVMRLIEEEAMKDRSAQIRAILPIPVATYLLNEKRSVLSDIEQRQGVRVMLLPQPDLETP
HYEVQRLRDDQVDPEDVGKSSYELSVEFDAHEAEESTFSKPTARAEAAVSSVAYSTPAPD
VSRQSTTAETSAPAEGGFIGRLLRGMGRLLGNEEQNTHQEDAHKATDRSSSERRSRSQTS
QAESSRDTNKGQSQEQNARQGTRDQSRQNDRNNGRSQRGGDRQQRQNNDQNEQRQEDNRN
KRDARQKDDNRQQKDDSRQKDRDNRQKSEERRSNSNGNSKSRADDRNGNGNGNGNGNGKR
QNRDTQPARQPRAQSSAESAQEKHSPHTTGSETVKGEKDAEKQDSTSHEKAPNNERTRNN
PRQRTRQHALKPEALAEQQRLQSEAESDHDITSETGMTSNGAVDQPVKKASTKAAADIDS
STASQARESEPSDTRPTSSPAKGGQQSQAVESSGKDTSEPTPAANAHRVSGQVEQKPDSA
QKATPSASTGDNAGVALAEAATPRDKPELSATGQEITTGKAQSDEEQQGKSSHSSSPATP
SSETTGDNAAAPPERRSRGRAHNDPREKRRREQSASDSSTH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctcatcaatgcgacccagcctgaagagctcagggtcgctctggtcgac
ggtcaacgactttacgatctggacatcgaatccggtgcccgggaacagaaaaaggccaat
atctaccgggggcgtattacccgggtcgaacccagtctggaagccgccttcgtcgacttc
ggtgccgagcgtcacggctttctccctctcaaggaaatatcccgcgaatattttgtccgt
gatcccggccagggcggacgacccaatatccgtgaagtgattcgcgatggtcaggaagtc
attgttcaggtcgacaaggaggagcgtggcaacaagggggcagcgctgactaccttcatc
agtctggctggacgctttcttgttctaatgcccaacaatccccgtgctggcggcatttcc
cggcggattgaaggtgaagaacgcgctgaactcaaggaagccatgagtggactggagatg
cccgagggcatgggggtgatcgtacgcaccgccggcatcggccgttccagcgaagagttg
cagtgggatctgaactacctggtacagatctgggagacgatcaccgaggaagccggcaaa
cgttcggcgcccttcctgatctatcgtgaatccaatgtcatcatccgcgccatgcgggat
tacctgcgccaggacatcggcgaggtgctgatcgacgatcccactgtttacaacgaggcg
ctggccttcgtacagcaggtgatgcctacctatcagcagaagatcaagccctatcgggat
gatgtgccgctgttctcgcgtttccagatcgaatcccagatcgaaacggcctacgaacgt
gaagtcaaactgccttccggcggctctgtggtgattgatcacaccgaggcgctggtatcg
atcgacatcaactcctcacgtgccaccaagggcggtgatatcgaggagaccgccctgcag
accaacctggaagcggccgacgagattgcacgtcagctgcgcctgcgcgatatcggcgga
ctggtggtcatcgacttcatcgatatgggcccttcccgcaatcagcgggaagtggagaac
cgcgtacgcgacgctctgaagattgatcgggctcgggttcagatcggtcgcatctcacgt
ttcggtctaatggaaatgtcacgtcagcggctgcgcccttcactgggagaaaccagtggt
gtggtctgccctcgctgtaatggccagggcaccatccgcgatgtccgctcactgtccctg
tcggtcatgcggctgatcgaggaagaggccatgaaggatcgaagtgcccagatccgtgcc
atccttcccattcctgtggcgacctacctgctcaatgaaaagcgcagtgtgctcagcgat
atcgagcaacgccagggcgtacgcgtcatgttactgccccaacccgacctggaaacgccg
cattatgaggtacaaaggctgcgtgacgaccaggtagatccagaggatgttggcaagtcg
agctacgaactgtcagtggagttcgacgcccacgaggctgaagaatccaccttcagcaag
ccgaccgcgcgcgcggaagccgctgtcagttccgttgcctactccactccagcgcccgat
gtcagccgccaatcaactactgctgaaacatctgcgcccgcagaaggtggttttattggc
cgattgctgcgtggcatgggccggctactgggtaacgaagagcagaatacccaccaggag
gatgctcacaaggcaacggatcgctcttcctccgagcgtcgcagtcgctcacagacttcc
caggccgagtcttcccgtgacaccaacaagggccagtcgcaggaacagaacgcacgccag
ggtacgcgggatcagagtcgtcagaatgatcgcaacaatggccgctcacagcgaggcggc
gatcgccagcagcgtcagaataatgaccaaaacgagcagcgtcaggaagataatcgtaac
aagcgcgacgctcgtcagaaggacgacaaccggcagcaaaaggatgatagtcgacagaag
gatcgggataaccgccagaagtccgaagagcgtcgaagcaacagtaacggtaacagcaag
tcccgagccgacgaccgcaatggcaatggcaatggcaatggcaatggcaatggcaagcgt
cagaatcgagacacgcaaccagccaggcaaccacgtgcccagagctcagccgaatctgct
caggaaaagcactcgccccatacaaccggatccgagaccgtaaaaggcgaaaaagacgca
gagaagcaggacagcacgtcacacgagaaagcgccaaacaacgagcgcacgcgtaataac
ccgcgccagcgcactcgtcagcacgctctgaagccggaagccctggcagaacagcagcgt
ctacagagtgaagccgaaagtgatcatgacatcacatcggaaaccgggatgacttccaac
ggcgctgtcgatcagcctgtgaaaaaggcatcaaccaaagcagcggctgatatagacagc
agtacggccagtcaggccagggaaagcgagccgagcgataccaggcccacctcctcaccg
gccaaaggcggtcagcagtctcaggcagtggaaagcagcgggaaagacacctctgaaccc
acgccagcagccaacgcgcatcgcgtcagtggtcaggtggaacagaagcctgattccgct
caaaaggccacgccctcagcttctaccggagataacgctggagtcgcgctggctgaagca
gccacgccccgagacaaaccagagctgagcgcgactggccaggagataacaaccgggaaa
gctcagtcagacgaggagcaacagggtaagtccagtcactcttcgtctcctgctactccc
tcatcggaaacaactggtgataatgcagccgcgcccccggagcgccgtagccgcggtcga
gcccataatgaccctcgagagaagcgtcgtcgcgaacagtcagccagtgactcttctacc
cactag
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