Kushneria phosphatilytica: FY550_09550
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Entry
FY550_09550 CDS
T06200
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kuy
Kushneria phosphatilytica
Pathway
kuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FY550_09550 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kuy03400
]
FY550_09550 (recB)
Enzymes [BR:
kuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FY550_09550 (recB)
DNA repair and recombination proteins [BR:
kuy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FY550_09550 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QEL11358
UniProt:
A0A1S1P108
LinkDB
All DBs
Position
complement(2065356..2069114)
Genome browser
AA seq
1252 aa
AA seq
DB search
MSEHLDIATLPLIGRRLIEASAGTGKTFTLAALYVRLILGHGGSDCAFPRPLMPPEILVV
TFTEAATEELRERIRLRLRQARDALLGRETVDVVLERLLAEVEPEHRLIQASRLDGAARV
MDDAAIFTIHGFCQRMLKRHAFDSGTLFAAELTNETERLFETLVEDYWRCHFYPLEPEQQ
GMLLDYWESPAALARSLQALLHGGRPQPLIWNEQSIEAPGTLAEALLPLTRAHQRLDEQA
ERVRQLWYSSGEEITTLLRDAIEQGRLAANRFKGDELAERLDRLAQWCARGESLLESGLL
VSGQPWCGQQRLKAATKKRADTPEHAFFSALDALAEARQALPEVQPYILAHARDTVSAAL
EQEKRRRGLWDFDDLLNGLDVALSGPAGERLAGRIRRELPVAMIDEFQDTDPVQYRIFSS
IYPAVPVDDMATTLLMIGDPKQAIYGFRGADIHTYLAARRDVTAHYTLATNFRSTEAMVS
AVNRFFGQCSAPFLLDEIPFEPVAAQGRQQRLVGEYGEEPALSCWLMSGEVSVGRETYAR
CMAEATRADIQRLLTGGLDGTTGFCDDRGHFEPLRPSDLAVLVRTGREAELVREALARGG
IRSVYLSQKSSVFQSPEAFHLLQLLEAVAQPDNDRRLRAALATRLLSDSLDTVAELEVDE
LAWETMVERFGEYHRLWQRDGVLPMLRAVMRHFDIGKRLIIRDEGERALTDLLHLGELAQ
AASVHLDGEQALLRWLHQALSGRFEAGLDPESLIQRLESDETLVRVITIHKSKGLEYAVV
YLPFACDYREIDGRATHFRLHDDERGRATVMAPTTAQRQQADRERLAEDLRLLYVAMTRA
RYACRLGIAPLYKGARKKEAPEGATTLLRSAFGSLMNGHTDKSLEAGHLRALLEKLSDGD
VITLSPPPQPASESLPGSVENREITPARRFTGRIDRNWWIASYTALMSGAHLQEGDEETE
SFGAMDEQPGIDLEVLAERNPVPLPSARRLIDFPRGPRAGTFLHGLFEQIDFGQLATLDD
PNSTHRRALAGLITARLARRGFEPHWRDILLSWIAQVLPAPLHPAIPGLSLAYPGHWRIE
LEFWLPARHADSQRLDALVRQHEYLPVPRPILPERELTGMLKGYIDLLFEYNGRYYLLDW
KSNHLGDLPEHYDESAMLGAIGAHRYDLQYVLYTLALHRLLRTRLAEYDYDDHCGGVFYA
FVRGMDGAGDGRGVLYRRPARELIETLDRWLEGDVSGREAGGIDTFYTEREP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacatctcgatatcgccaccctgccactgatcggtcgtcgtctgatcgaagcc
agtgccggtaccggcaagaccttcaccctggcggcactttatgtacgactgatcctcgga
catggcggttcggactgtgcctttccccggccgttgatgccgcccgagatcctggtcgtc
acctttaccgaggccgcaacggaagagctgcgtgaacgcattcgactgaggttgcgtcag
gcgcgcgatgccttgctgggacgtgaaaccgttgatgtcgtgctggaacggttgctggcg
gaggtcgagcccgaacaccgcttgattcaggccagtcgactggatggagcggcacgtgtc
atggacgatgccgccatctttaccattcatggcttttgtcagcgcatgctcaagcgccat
gcctttgacagcggcacgctgtttgctgccgagttgaccaatgaaaccgagcgcttgttt
gaaaccctggttgaagattactggcgttgtcacttctacccgctcgagcccgaacagcag
gggatgttgcttgattactgggaatccccggcggcactggcccggtcactacaggcactg
ttgcatggcggtcgaccccagccgctgatctggaacgaacaatcgatcgaagcaccggga
acactggccgaggcgctactaccgctgactcgagcccatcagaggcttgatgagcaggcc
gagcgggtacgccagttatggtattcctcgggtgaagagatcacgacactgctacgtgat
gctattgagcagggccggctggctgccaatcgtttcaagggggatgagctggccgagcgt
cttgatcgactggcgcagtggtgtgcacgtggtgagtcactgctggagtctggcttgctg
gtgtccggccagccctggtgtgggcagcaacgattgaaggctgctacgaaaaagagggct
gatacacccgaacacgcgttcttttcagcgcttgatgcgctggccgaggctcggcaggcg
ctgccggaggtacagccgtacattctggcgcatgcccgggatacggtctctgccgctttg
gagcaggagaagcgtcggcggggactctgggatttcgatgatctgctcaacgggcttgat
gtggcactatcgggacctgcaggcgagcgtctggcaggccgaattcgccgtgaattgccg
gtagccatgatcgatgagtttcaggacacggacccggtacagtaccgtatcttctcctcg
atctatcctgcggtgccagtcgatgacatggccacgacccttctgatgatcggtgatccc
aagcaggccatttatggctttcgtggggctgatatccatacctaccttgccgcgcgtcgt
gatgttacggcgcactatacgctggccaccaatttccgctcgaccgaggcgatggtgagt
gctgtcaatcgcttcttcggtcagtgttcggcgccatttctgctggatgaaattccgttc
gagccggtggcagcacaggggcggcaacaacgattggtgggagagtatggtgaagagccg
gccttgagctgttggttgatgtcgggagaggtatctgtcggacgggagacctatgcccgt
tgcatggcagaggcgacccgagccgatattcagcgtctgttgacaggtgggctcgatgga
acgacagggttttgtgacgacaggggccattttgaaccactgcggccctcggatctggcg
gtattggtacgcaccggacgcgaggcagaactggtgcgcgaagcgctggcacggggtggg
atccgaagcgtctatctcagtcagaagtcctcggtgtttcagtcgccggaagctttccac
ctgttgcagctgctcgaggcggttgcccagcccgataacgaccgcaggctaagagccgcg
ctggctacccggctgctgtccgattcgctggataccgtggccgagctcgaggttgatgag
ctggcctgggagacaatggtcgagcgttttggcgagtaccatcggctctggcagcgtgat
ggcgtattaccgatgctgcgcgcggtgatgcgtcactttgatatcggcaagcggctgatt
attcgcgatgagggggagcgcgctctgactgatctgctgcatctcggggagctggcccag
gcggcgagtgtgcatcttgatggcgagcaggcactgctgcgttggctccatcaggccctg
tcgggtcgttttgaagccgggctcgatccggagtcgttgatccagcggctggagagcgat
gaaacgctggtcagagtgatcaccattcacaagtccaaggggcttgagtatgccgtggtc
tatctgccgtttgcctgtgactaccgggagatcgatggtcgggccacacattttcgcctg
catgatgacgaacgaggcagggcaactgtcatggcgccgaccacggcgcagcgacaacag
gctgatcgggagcgtctggccgaagatctgcggttgctgtatgtcgccatgacgcgcgcg
cgctacgcctgtcgactgggtattgcgccgctgtacaagggggctcgcaaaaaggaggcc
cccgagggagcaaccaccctcctgcgctcggcgttcggcagcctgatgaatggccatacg
gataaatcgctggaagcaggtcacttgcgcgcactactggagaagctgagtgatggtgac
gtcataacactgtcacctccgccacagccggcgtccgagtcgctgcctggttcggtggaa
aatcgcgaaatcaccccggcgcgccggtttaccgggcgaatcgaccgcaactggtggatt
gcttcctataccgcattgatgagcggcgcccatctgcaggaaggggatgaggaaacagag
tctttcggtgccatggacgagcagcccggcattgatctggaggtgctggccgagcgcaat
ccggtaccgctgccatctgcccggcgtctgatcgatttcccgcgtgggccgcgtgccggt
acttttttgcatggcctgttcgaacagatcgatttcgggcaactggctaccctggatgac
ccgaacagtactcatcgccgcgcgctggccgggttgatcacggcacgtttggcaagacgt
ggctttgagccgcactggagagatattctgctttcatggatagcgcaggtcctgcctgcg
ccgctgcatccggcgatccccggcctgtctctggcgtatcctggtcactggcgtattgag
ctggaattctggctgcctgcgcgacatgctgacagccaacgccttgatgccctggtgcgc
cagcatgagtatctgccggtgcctcgaccgatactgccagagcgtgagctgaccggcatg
ctcaagggctatattgatctgctgttcgaatacaacggccgttactacctgctggactgg
aaatccaaccatctcggcgatttacccgagcattacgatgaatccgccatgctgggcgcc
atcggggcacatcgttatgatctgcaatatgtgctgtataccctggcactgcatcgcctg
ctgcgtacccgactggcggaatacgactacgatgaccactgcggtggggtcttctatgcg
tttgtgagaggtatggatggagcaggtgatgggcgcggtgttctttatcgacgacctgcc
cgtgaactgatagagacacttgatcgctggctggagggtgacgtatcaggtcgtgaggca
ggggggattgataccttctacacagagcgagagccatga
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