Kushneria phosphatilytica: FY550_10725
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Entry
FY550_10725 CDS
T06200
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kuy
Kushneria phosphatilytica
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kuy03016
]
FY550_10725 (rnd)
Enzymes [BR:
kuy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FY550_10725 (rnd)
Transfer RNA biogenesis [BR:
kuy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FY550_10725 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QEL11557
UniProt:
A0A1S1NWQ3
LinkDB
All DBs
Position
complement(2325947..2327092)
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AA seq
381 aa
AA seq
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MTSSVPWHFINTPEQLDEACKVLARRSVLGVDTEFMRETTFYPIPALIQLGDEEIVYLID
PTVLSPSEALRSLLGPKGPLKLLHACSEDLEVFIRWLGALPQPLVDTQLAHALQGGEPTL
GYQRLVAHWCEVELPKGETRSDWLARPLNERQCHYAVQDVAWLPRVWSQLKSVLARQGRL
EWLYADCARLVEAANTVRDDMQFYLRNRNAWRLGQRQLAALQRLCAWREVTARERNQPRN
RLCSDALLFMVAEAMPRNRHELSLIEGIRPTMIKRDGDALLAAVRQARELEEPSLPEPLP
SPISSDWKKRMKALKRVVQAHAEQLSLAPELLARRRELESWVMADMAGHAVAAPESDDWR
GHLLNEELRAALAQLREGDRQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgagcgtgccctggcatttcatcaatactccggaacagctcgacgaggcctgc
aaggtgcttgcccggcgcagtgtgctcggtgtggataccgagttcatgcgtgagacgacc
ttttatccgatcccggcgctgattcagctcggcgatgaggagatcgtttatctcatcgac
ccgacggtactgtcgccttccgaggctcttcgctcgctgcttggtccgaaagggccgctc
aagctgctgcatgcctgcagcgaagatcttgaggtgtttattcgctggctgggagcgctg
ccgcaaccgctggttgatactcagctggcgcatgccttgcagggaggggagcccaccctc
ggctatcagcgcctggtggcgcactggtgtgaagtcgagctgcccaagggagaaacccgc
tcggactggctggcacgcccactgaacgagcgtcagtgtcattatgccgttcaggatgtt
gcctggttgcccagggtttggtcacagctgaagagcgttctggcgcgccagggtcgactg
gaatggttgtatgccgattgtgcgagactggtggaagcagccaatacggttcgtgatgac
atgcagttttaccttcgcaatcgcaatgcgtggcggcttgggcagcgtcagctggcagcg
ttgcaacggctttgtgcgtggcgagaagtgactgcccgcgagcgtaatcagccgcgcaac
cgcctgtgtagtgatgcgctcctgttcatggtggccgaagccatgccgcgcaatcgccat
gagctgtcgttgatcgagggtatccgacctaccatgatcaagcgggatggcgatgccttg
ctggcagccgttcgacaggcaagggagctggaagagccgtcgctacccgagccattacca
tcacccatttcatcagattggaaaaaacgcatgaaagcgctcaagagggtcgtgcaggcg
cacgccgaacagctgtcgctggcccctgagctgctggcgcggcgtcgcgaactggaaagc
tgggtgatggctgatatggcaggacatgcagtggccgctccagagtccgacgactggcga
gggcatctgctgaatgaagaactgcgtgccgccctggcgcaactgcgagagggagatcgc
caatga
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