Kushneria phosphatilytica: FY550_13005
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Entry
FY550_13005 CDS
T06200
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kuy
Kushneria phosphatilytica
Pathway
kuy03030
DNA replication
kuy03430
Mismatch repair
kuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FY550_13005 (dnaE)
03430 Mismatch repair
FY550_13005 (dnaE)
03440 Homologous recombination
FY550_13005 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kuy03032
]
FY550_13005 (dnaE)
03400 DNA repair and recombination proteins [BR:
kuy03400
]
FY550_13005 (dnaE)
Enzymes [BR:
kuy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FY550_13005 (dnaE)
DNA replication proteins [BR:
kuy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FY550_13005 (dnaE)
DNA repair and recombination proteins [BR:
kuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FY550_13005 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QEL11964
UniProt:
A0A1S1NWU9
LinkDB
All DBs
Position
complement(2831095..2834610)
Genome browser
AA seq
1171 aa
AA seq
DB search
MTTPFVHLRLHSEYSLADGLIRLKPLIARASEVGQPALAITDETNLFALVKSYKSARAAG
LKPIIGSDVWLQNPFDEAHPWRLTLLAMNNDGYRNLTELISRGWQEGQVQGRAVLRKEWV
LERSDGLIALSGAREGEIGRFLLAEHRETAESLLKEWQRFFPDRFYLELQRTGRALDEEC
LHASVALAAATDTPVVATNDVRFLDREDYWAHETRVAIGEGRALDDPRRERRYSEDQYFR
SGEEMAELFSDIPEAIENTVMIAARCNVDVRLGEIFLPEYPVPEGQSMEQFFRELAHDGL
IKRLEVLFEGSHPIYPGRERAEHEPSYRERLDFELDIINRMGFPGYFLIVMDFIRWAKDN
DVPVGPGRGSGAGSLVAYALEITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVADRYGRDAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLEKA
YGQESALREFLEADEDAQEIWDMALRLEGITRGTGKHAGGVVIAPTKLTDFAPLLCDDDG
SGLMVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALEMVDDVRAREGQGPLDIGTIPLDDV
PTFEMLKKAETTAVFQLESRGMKELIKRLQPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAELAYPHPDYQHEWLKSVLEPTYGVILYQEQVMQIAQVLAGYSLGQADMLRRAMGK
KKPEEMAKQRVGFLDGCKENGIDEDLAGNLFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL
KAHYPAPFMAAVLSTEMDNLDKAVPLIEECRRMGLTVTPPNVNIGAYRFSVDEQNHVVYG
LGAIRGVGEGPIGAIVEAREAGGPFRDLFDFCRRIDAGRINKRTIEALIRSGALDQLGPS
RAVLAGALEDALRAASQSHANASLGMIDMFGEAFDTTSASDDSDCYADYRSVRDWSDRDR
LAGEKETLGLYLTGHPIDEYEAELKRFVSTRIVDLKPAREPQRVAGLIVAMRTMKSKRGD
TIAFVTLDDRTGRIEASLFGELYDQVRHQLAPDQVIILEGEVSLDDYSGGLRLRGKEVTP
MAAARARFGEAIELSIDGSRLNGRFSSGLREQLSRHLDESGLPVRLNYRNEQASGCFELG
NDWRVLPCDDLLMALAEVEGHPDVTLAYRQT
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccttttgtccatctgcgcctgcacagtgaatactcccttgctgatgggctg
atccggctcaagccgttgatcgcccgggccagcgaagtcggtcagccagccctggcgatt
accgatgagaccaatctttttgctttggtcaaatcctacaagagcgcgcgggcagccggc
ctcaagccgattattggcagtgatgtctggctgcaaaaccctttcgatgaggcacatccc
tggcggttgacgctgctggcgatgaacaatgacggttatcgtaatctcaccgaactgatt
tcacggggttggcaggaagggcaggtccagggtcgcgcggtgctgcgcaaggaatgggta
cttgagcgcagtgatggtctgattgcgctctcgggtgcccgggaaggggaaatcggtcga
ttcctgctggctgaacaccgggaaaccgccgagtcgctgttgaaagagtggcagcgtttc
ttcccggatcgcttctatctcgaactgcagcgtaccggacgtgcgcttgatgaagagtgc
ctgcatgccagcgtggctctggcggcagcgaccgatacgccggtagtggcgaccaatgat
gtacgctttctcgaccgcgaggactactgggcccatgagacccgggtggcaatcggcgaa
ggtcgggcactcgatgacccaaggcgcgagcggcgctatagcgaagatcagtatttccgt
agtggcgaggaaatggcggagctgttctccgacatccccgaggcgatcgaaaatacggtc
atgatcgcggctcgctgtaacgtcgacgttcgtctgggcgagatctttctgccggaatac
ccggtaccggaagggcaatcgatggagcagttcttccgtgagcttgcccacgatggtctg
ataaaacgactggaagtcctgttcgaggggtcgcatccgatctaccccgggcgtgagcgc
gccgaacatgaaccgtcctatcgtgagcgactcgacttcgagctcgatatcatcaaccgg
atggggtttcccggttacttcctgatcgtgatggactttatccgctgggccaaggacaac
gatgtcccggttggacccggtcgtggctcgggggctgggtcactggtggcctatgcgctg
gagattaccgatctcgatccactggaatatgatctgctgttcgagcgctttctcaatccc
gagcgtgtctcgatgcccgacttcgacgttgacttctgcatggagaaacgcgaccgggta
atcgattatgttgccgaccgttacggtcgtgatgccgtttcccagatcgtaaccttcggc
accatggccgccaaggctgtggtgcgggatgtggcgcgcgcccagggcaagccgtactcg
ctgggggacaagctctccaagctgattcccttcgaagttggcatgaccctggagaaggcg
tacggccaggagagtgcgctgcgcgaatttcttgaagcggatgaggatgcccaggaaatc
tgggacatggcgctcaggttggaaggtatcacccgtggtaccggcaagcacgccggcggg
gtggtgatcgcgccgacgaaactcaccgatttcgcgccactgctttgtgatgatgatggc
agtggcctgatggtgcagttcgacaagaacgatatcgaggaggccgggctggtcaagttc
gacttccttggtctgcgcacgctgaccattatcgactgggcgctggaaatggtcgatgac
gtacgcgccagggaagggcagggcccgctggatatcggcactattccgctcgatgatgtg
cccaccttcgagatgctcaagaaagccgaaaccacggcggtcttccagcttgaatcgcgc
ggcatgaaggagctgatcaagcggctccagccggactcgctggaggacatgattgccctt
gtggcgctgttccgccccgggccgctgcaatccggcatggtggatgactttatcaaccgc
aagcatggccgtgccgaactcgcttatccacacccggattaccagcatgaatggctgaaa
tcggtcctggagcccacctacggcgtcatcctctatcaggagcaggtgatgcagatcgcc
caggtgctggcgggttacagcctggggcaggccgatatgctgcgccgtgccatgggcaag
aagaagcccgaggaaatggccaagcagcgtgtcggttttctggatgggtgcaaggaaaac
ggcatcgacgaggatctggctggcaacctcttcgatctggtggagaagttcgccggctac
ggcttcaataaatcacactcggccgcctatggcctggtctcctatcagactgcctggctg
aaagcgcactatccggcaccgttcatggcggcggtgctttcaaccgagatggataatctc
gacaaggcggtgccgctgattgaagagtgccgacgcatgggactgacggtaacgccgccc
aacgtcaacatcggcgcctaccgtttcagtgttgatgaacagaatcacgtggtttatggg
ctgggtgccattcgcggtgtcggcgaaggaccgatcggggcgatcgtcgaggctcgcgaa
gcgggcggccccttccgtgatctgttcgatttctgtcgtcgtatcgatgccggcagaatc
aacaagcgcaccatcgaagcattgattcgttccggtgcgctggatcagctcgggccttca
cgggcggtattggctggtgcgctggaggacgccctgcgagcggcttcccagagtcatgcc
aatgccagtctcggtatgatcgacatgttcggtgaggcttttgatacaacttcggcttcc
gatgacagcgactgttacgctgattaccgcagcgtgcgggactggtcggatcgtgatcga
ctggcaggcgagaaggagacgctcggactctacctgaccggtcacccgatcgatgagtac
gaggctgaactcaagcgttttgtatcgacgcgtatcgtcgatctcaaacctgcccgggag
ccacagcgggttgccggactgatcgtggcgatgcgtaccatgaaatcgaagcgtggcgat
accattgctttcgtgacactggatgatcgtaccggacgtatcgaagcctcgctgttcgga
gagctttatgatcaggtgcgccatcagctggcacccgatcaggtcattatcctggaaggc
gaggtcagtctcgatgactattccggcggactgcgtttgcgtggcaaggaagtgacgccc
atggcagccgccagagcccgctttggcgaggccatcgagctcagtatcgatggcagtcgc
ctcaatggtcgtttctcttccggcctgcgtgagcaattatcgcgtcatctggatgagagt
ggccttcccgtaaggctgaactaccgcaatgagcaggccagtggttgctttgaactgggc
aatgactggcgggtgctgccctgcgatgatctgctgatggcgctggcggaagtggaggga
catcccgacgtgaccctggcctatcgccagacctga
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