Kushneria phosphatilytica: FY550_16520
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Entry
FY550_16520 CDS
T06200
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kuy
Kushneria phosphatilytica
Pathway
kuy03420
Nucleotide excision repair
kuy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FY550_16520 (uvrD)
03430 Mismatch repair
FY550_16520 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kuy03400
]
FY550_16520 (uvrD)
Enzymes [BR:
kuy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FY550_16520 (uvrD)
DNA repair and recombination proteins [BR:
kuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FY550_16520 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FY550_16520 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QEL12588
UniProt:
A0A1S1NVF8
LinkDB
All DBs
Position
complement(3558089..3560290)
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AA seq
733 aa
AA seq
DB search
MDASPLLDSLNPAQRDAVGAPQGNLLVLAGAGSGKTRVLVHRIAWMLSVEGLSPWSILAV
TFTNKAAREMRARLETLIDTSLRGMWVGTFHSISHRLLRTHWRDAGLAEHFQIIDSDDQL
RLVKRLLREYSIDDERFPPKQVQYFIGGCKEEGLRPGDVDPHGDQYMAQMVELYTLYQQA
CERSGLVDFGELLLRALELLRDNPRLLAHYRERFQHLLVDEFQDTNTLQYAWLKLLAGDR
ACLTAVGDDDQSIYGWRGAKVENLERFRSEFPDTRLVRLEQNYRSTSAILETANALIRNN
AGRMGKELWTEVEAGEKIRVYGGFNDLDEARFIVDTIAEQVREGRMRREFAILYRSNAQS
RVIEESLIRAGVPYRIYGGQRFYERLEIKNALAYLRLLISRDDDASLERVINVPARGIGT
RSVEMLRARARDEGTSLWQAVNDAPAAGILKGRAASSVRAFSDLIDQLDNDTQGLALHEI
IDHVIRATGLIEHHRAEKGEKGQARVENLEELVSAAKAYAQGDAFEAIDDGASNSLGEFL
SEAALNSGEHEADEFEDAVQMMTLHSAKGLEFPVVFIAGVEEGLFPHRMSLEEPGRLEEE
RRLCYVGITRAMERLYLTHAETRRLHGKETWQRPSRFLRELPEEYLEEVRLRGQVSRPMS
AQGGSAGIRQESVEGDDEQPSLSLGQWVRHPVFGEGVIINAEGQGQRARVQVSFEHEGDK
WLVLGFAKLEALT
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgcctctgctcgactctctcaatccggcgcagcgcgacgccgtcggtgca
ccccagggtaacctgctggtgctggccggtgccggctccggcaagacccgggtgctggtc
caccgcattgcctggatgctctcggtcgaagggctttcgccgtggtcgattctcgccgtc
acctttaccaacaaggcggcacgcgagatgcgggcgcggctggaaacgctgatcgatacc
tcgctgcgaggcatgtgggtggggaccttccactccatctcgcatcgattgttgcgtacc
cactggcgcgatgccgggctggccgagcacttccagatcatcgacagcgacgatcagctc
cggctggtcaaaagattgctgcgcgaatacagcatcgatgatgagcgcttcccgcccaaa
caggtgcagtacttcatcggtggctgcaaggaggaagggctgcgaccgggggatgtcgat
ccccatggcgatcagtacatggcgcaaatggtcgagctctataccctctatcagcaggcg
tgtgagcgcagcgggctggtcgatttcggcgaactgctgctgcgtgcgctcgaacttctg
cgcgacaatccgcgtctgctggcgcactatcgcgagcgttttcaacacctgctggtcgat
gagtttcaggataccaataccctgcaatacgcctggctgaagctgctggccggtgatcgg
gcctgtctgaccgctgtcggcgacgatgaccagtcgatctacggctggcgtggcgcgaag
gtggagaatctggagcgctttcgcagcgagtttcccgatacccgtctggtacggctcgag
caaaactatcgttccaccagcgccattctggaaaccgccaacgcgctgattcgcaacaat
gccggacgcatgggcaaggagctgtggaccgaggtcgaggcgggcgagaagattcgggtc
tatgggggcttcaacgatcttgatgaggcacgcttcatcgttgacaccatcgccgaacag
gttcgcgaaggccgaatgcgacgcgagttcgccatcctgtatcgctccaatgcgcaatcg
cgagtgatcgaggaatcgctgattcgcgccggagtgccctaccgcatttatggagggcag
cgcttctacgaacgcctcgagatcaagaatgcactggcctatctgcggctgctgatttca
cgcgacgatgatgcctcgctggaacgggtgatcaacgtaccggcccgtgggatcgggact
cgcagtgtcgaaatgctgcgagcgcgggctcgtgatgaaggcacctcgctgtggcaggcg
gtcaacgatgcaccggccgccggtattctcaaggggcgcgccgccagctcggtgcgcgcc
ttcagcgatctgatcgatcagctcgataacgatacccagggattggcactccacgagatc
atcgatcatgtcatccgcgccaccgggctgattgaacaccatcgcgccgagaagggcgaa
aaggggcaggctcgggtcgagaatctcgaggagctggtcagcgccgcgaaggcctatgcc
cagggcgatgccttcgaggccatcgatgatggggccagcaattcgctgggtgaattcctc
tccgaagcggcgctcaactccggtgagcacgaagccgacgaattcgaggatgcggtgcag
atgatgacactgcactccgccaagggactcgaatttccggtggtctttatcgccggagtc
gaagagggacttttcccgcacaggatgtcactggaggagccgggaagactcgaggaggag
cgccggctctgttatgtcggcatcacccgggcgatggaacgtctctatctgactcatgcc
gaaacccggcgcctgcacggcaaggagacctggcaaaggccttcgcggtttttgcgcgag
ctcccggaagagtacctcgaggaagtgcgtctgcgtggtcaggtgtcacggccgatgtcg
gcacagggcggcagtgcaggtattcgacaggaatcggttgagggcgatgatgagcagccg
tcactgtcactggggcagtgggtgcgtcatccggtcttcggtgaaggcgtcatcatcaat
gccgagggtcaggggcagcgggcccgggtacaggtcagtttcgagcacgagggtgacaag
tggctggtgctgggatttgccaaactcgaggcgctgacctga
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