Klebsiella variicola At-22: Kvar_0439
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Entry
Kvar_0439 CDS
T01170
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kva03019
]
Kvar_0439
Messenger RNA biogenesis [BR:
kva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Kvar_0439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
ADC56369
LinkDB
All DBs
Position
463026..464966
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDQ
LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRTDSYRPLGSHEQFREITVPSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQST
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttatcacgctgctaactagcctgaccatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattgagaacaaggtcgaaaac
cgggttcaggcggtggcgaccatgctggataaccggctcatcaccacctcttttgatcag
cttgagccgcagctggatgagctgatgacgccgatcgagatcgtgcatatcgatttcatg
cttaacggcaaaccactctacagccactcccgaaccgacagctaccgcccgcttggcagc
catgagcaattccgtgagatcacggtcccgtcgcttaaacaccccggtatcactctgcat
ctggtctacgttgacccaatggtgaactatttccgctcgctgtcgatcacggccccgctg
tcgatctccatcggctttatggtggtgattattttcttcgccgtccgctggatccgccgc
cagctggctggtcaggagctgcttgagctgcgttccacgcgcatcctgagcggcgagcgc
gggccgcaggtgcgcggatcggtctatgaatggccagccagcaccagcagcgcgctggat
atgctgctgtcggagctgcaattcgccagcgatcagcgcagccgtatggatacgctgatt
cgctcctatgcggcacaggattctaaaacgggcctgaataaccgcctgttctttgataat
cagctggccacgctgctggaagaccaggagaaagtgggcgcctacggcatcgtcatgatg
atccgtctgccggagttcgatctgctacgggacaactggggacgggcggccgccgaagag
cattacttcacgcttatcaacctgctctctacctttattatgcgttatcccggcgcgcta
ctggcgcgctatcaccgtagcgacttcgccgtgctgctgccgcaccgcacgttaaaagag
gcagatagtatcgccgggctgttgctgaaggccatggacgcactgccgccgacgcgcatt
ctcgatcgcgacgatatgatgcatatcgggatctgtgctttccgcagcgggcaatcgaca
gcgcaggtgatggagcacgcggaagcggcaacgcgcaacgcggtgctgcagggtagcaat
agttggtcggtttacgatgacacccttcctgagaaaggtcgcggcaacgttcgctggcgg
acgctgatcgaacagatgctgagccgcgggggaccgcggttgtaccaaaaacctgccgtt
acccgcgatggccgggtgcatcaccgtgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgatcgccgccgagtacatgccgatggtgctgcagtttggtctggcggaggagtat
gaccgcctgcaggtgacgcgcctgctgccatttttaggcttctggcctgaagaaaacctg
gcgttacagctgtcggtggagtcgctgatccgtccccgttttcagcgctggctgcgcgat
gccttaatgcagtgtgaaaaatcgcagcgtcagcggattatttttgaacttgcggaggca
gatgtttgtcaatatatcggccgtctgcagccggttatgcggttggttaacgccctgggc
gttcgggtggcggtcgttcaggcgggactaaccctggtgggaaccagctggatcaagcag
ctggatgcggagttgatcaaactgcatcctgggctggcgcgcaacattgaaaagcgcagt
gagaaccagctgctggtgcaaagtctggtggaagcctgcaaaggcatgcctatgcaagtt
tttgcgacgggcgtacgcagccgcagcgagtggttagtgctgtcccaatgcggtgtcaca
ggcggtcagggggaattttttgcggcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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