Klebsiella variicola At-22: Kvar_0525
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Entry
Kvar_0525 CDS
T01170
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kva
Klebsiella variicola At-22
Pathway
kva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kvar_0525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kva03019
]
Kvar_0525
03016 Transfer RNA biogenesis [BR:
kva03016
]
Kvar_0525
Enzymes [BR:
kva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Kvar_0525
Messenger RNA biogenesis [BR:
kva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Kvar_0525
Transfer RNA biogenesis [BR:
kva03016
]
Prokaryotic type
tRNA degradation factors
Kvar_0525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
ADC56455
LinkDB
All DBs
Position
551786..553921
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEAPVAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtaaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacaccgcggta
ttcgtgaccgttgtgggtcagaaaaaagcgaagccaggccaggactttttcccgctgact
gttaactaccaggagcgtacttacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggtcgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgtcgtctccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcttccgctgcgctgtccctg
tctggtattccgttcaatggcccaatcggcgccgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccaacccaggaagaactgaagtccagcaaactggatctggtggttgcc
ggtactgaagcggccgtgctgatggttgaatccgaggctgaactgctgagcgaagaccag
atgctgggcgcggtggtcttcggccacgagcagcagcagattgttattcagaacatcaac
gacctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagccgtcaacgaa
gcgctgaacgcgcgcgtggctgcgctggctgaatcccgcctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgccacg
ctggtagcagaagatgaaaccctggacgctaacgagctgggtgaaatcctgcacgccatc
gagaaaaacgtggttcgtagccgcgtactggcaggcgagccgcgtatcgatggccgcgaa
aaagacatgatccgtggtctggacgttcgtaccggcgtactgccgcgtactcacggttcc
gcactgttcacccgtggcgaaacgcaggcgctggttaccgcgactctgggtaccgcacgc
gacgcgcagaacatcgacgaactgatgggcgagcgcaccgactccttcctgttccactac
aacttccctccgtactccgtaggcgaaactggcatggtgggttctccgaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgcggcgtattggccgtgatgccgactatcgacgaa
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttccatg
gcctccgtctgtggcgcctctctggcgctgatggatgcgggtgtgccggtgaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgtcgttctgtctgac
atcctgggtgacgaagaccaccttggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggcgataaagcacagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgcatctacaatggtaaagtgacccgtatcgttgactttggcgcgttcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgataagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtgccggttaaggttctggaagttgac
cgccagggccgtgttcgtctgagcatcaaagaagcaactgaacagactccgtctgccgca
gcgccggaagctccggtcgccgagcagggcgagtaa
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