Klebsiella variicola At-22: Kvar_0841
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Entry
Kvar_0841 CDS
T01170
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kva
Klebsiella variicola At-22
Pathway
kva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Kvar_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kva03400
]
Kvar_0841
Enzymes [BR:
kva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Kvar_0841
DNA repair and recombination proteins [BR:
kva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Kvar_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ADC56771
LinkDB
All DBs
Position
882003..885539
Genome browser
AA seq
1178 aa
AA seq
DB search
MTDTAESLDPLRLPLRGERLIEASAGTGKTFTIAALYLRLLLGLGGESAYSRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIVDKDDAAKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPDETLAERHQQIIGRIDSLKQQWREQV
GEIEGVLENSGLDRRKYNRGNQGKWLEKVNAWAQEETLSYQLPDALEKFAQSFLHERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLRFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSEYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQRPGELDLTPWQAPAATIPPLSARELQRRIADDWRV
TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGADIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEETS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccctgaggggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgctggggctgggcggcgagtccgcctattcccgcgctatcagcgtcgaagagctgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgaactgcgcatcgcctgcctgcgcggcgaatccgacaatccgctctacagcgcgctg
ctggcggagatcgtcgataaagacgacgccgcgaagacgctgctgctggctgaacggcag
atggacgaggcggcggtattcaccatccacggcttttgccaacggatgctgagccttaac
gccttcgagtcgggcatgctgttcgagcagcaactgatcgaggatgaatcccgcctgcgc
tatcaggcctgcgctgacttctggcgccgccactgctatccgctgacccgcgatatcgcg
gcggtgatccacgacgtctggaaagggccgcgcgatctgctgaagtctcttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccggcccccgacgagacgctggccgaa
cgccatcagcagatcatcggccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgctggaaaattccgggctcgaccggcggaaatacaatcgtggc
aaccagggcaaatggcttgagaaagtgaacgcctgggcgcaggaagagacgttaagctac
cagctgcccgacgcgctggagaaatttgcccagtcgtttctgcatgagcgcaccaaagcc
ggtggcgaaccaccggtgcatcccctgtttagcgccgtagagtcgctgctggcctcctcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcc
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgaggcgctggccagcgccattcgccagcgttttccggtg
gcgatgatcgacgaatttcaggacaccgacccccagcagtaccggatttttcgccgcatc
tggcgccagcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tacaccctcgataccaactggcgctcatcgccgggcatggtgggcagcgtcaaccggctg
ttcagcctcagcgataaccccttcatgttccgcgagatcccgtttctgccggtgaaggcg
gcggcaaagaatcaggggctgcgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggctgatgcccggcgacaccgtcgggtctggcgattatcaaacgtttatggcgcag
ctctgcgccacgcagattcgcgactggctgagcgccggtcagcaggggcgcgcgctgctg
tggcgcggggaaacctcgcgcccggtgcaggcctcggatattaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccctcggtctac
ctctctaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgctggccccggagcgggaaaataccctgcgcagcgcgctggctacctcgatg
tttggcctgaccgcgctggatattgaaaacctgaaccaggatgagcaggcgtgggacgcg
ctggtggaagagttcagcgaataccgccagatctggcgtcagcgcggagtgatgccgatg
ctgcgggcgttgatgacggcccggcatatcgccgagaatctgctggcgacccgcggcggc
gagcggcgcttaaccgacattctgcatatcagcgaactgctgcaggaggcggccagccaa
ctggaaagcgagcatgccctggtgcgctggctggcgcagcatatcgccgagccggacagc
aacgccgccagccagcagatgcgtctcgaaagcgataagcacctggtgcaaattgtcacc
attcacaagtcaaaagggctggaataccccctggtctggctgccgtttatcgcccggttt
cgtaaacaggaccaggcgttctaccacgatcgcgagacgttcgcggcggtactggatctg
ggccaggatgaggccagcctcgagctggcggaggcggaacggctggcggaagatctgcgc
ctgctgtacgtcgccctgacccgtgcggtctggcactgcagcctcggcgtggcgccgctc
agcagccggaaatccggcaacagcgatttccacctcagcgcgctggggcggctgttgcag
gcgggcgaagccatggacgccgccgggctggccgcgcggctggcggacttctgtcatggc
gatattgcattgcagagaccgggcgagctggatctgaccccgtggcaggcgcccgcggcg
accatccccccgctgtcggcgcgcgagctgcagcgccgcatcgccgacgactggcgggtg
accagctactccggactgcaacagcatggtttcagcggcgggcaggatctgctgccgcgt
ctggatgtcgatgccgccggcgtcggcgaagtcgtggaagagccgcagctgactccgcac
cagtttccgcgcggcgccgcgccggggaccttcctgcacagcctgtttgaggagctggac
ttcacccagccggtgccggacgggtggatggcggagaagctgcagctgagcgggtttgac
gcgcagtgggcgccggtgctgaccgactggctggggggcgtgctgaagactcgcctgccg
ggagcggatattgcgctcaatcagcttgcggcgcgggataaacaggtggagatggcgttt
tatctgcctatcgctcagctgctgacggcggagcgccttgacgcgcttatccgccagtac
gatcccctctccgccgacacgccaccgctggatttccgccaggtgcgtggcatgctgaag
ggctttatcgatctggtcttccgccacgaaggccgttattacctgctggattacaaatcc
aactggctgggggaagaccgcgaggcctacacccggccggcaatggagcaggcgatgcgt
gcccaccgctacgatctgcagtatcagttgtacagcctggcgctgcaccgctatctgcgc
caccggctggccgattatgactatgaccgccacttcggcggcgtgatttatcttttcctg
cgcggcatggacgggcaggagggggggcaggggatcttcaccacccggccggtgagaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggagacctcatga
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