Klebsiella variicola At-22: Kvar_0962
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Entry
Kvar_0962 CDS
T01170
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kva03021
]
Kvar_0962
Transcription machinery [BR:
kva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Kvar_0962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ADC56890
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Position
1013292..1014284
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AA seq
330 aa
AA seq
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MSQNTLKVHDLNEDAEFDENGIEVFDEKALVEEEPSDSDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQGQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttcatgatttaaatgaagacgcggaatttgatgagaac
ggaattgaggttttcgacgagaaggccttagtagaagaggaacccagtgatagcgatctg
gctgaggaagagctgctgtcgcaaggcgcaacacaacgcgtacttgacgccactcagctt
tatcttggagagattggttattccccactgctgaccgcggaagaggaagtctatttcgcg
cgtcgcgcactgcgtggtgatgtcgcttcacgccgtcgcatgattgaaagcaacctgcgt
ctggtggtgaagattgcccgtcgttacagcaatcgtggtctggcgctgctggatctgatt
gaagaaggtaacctcggtctgatccgcgccgttgaaaagtttgacccggaacgtgggttc
cgtttttcgacttatgcgacctggtggatccgccagactattgaacgggcgatcatgaac
caaacccgtacgatccgtttgccgatccacattgttaaagagctgaacgtctatctgcgt
accgcgcgcgagttgtcccataagctggaccacgagccgagtgcggaagagattgccgaa
cagctggacaaaccggtcgatgacgtcagccgtatgctgcgtctgaacgagcgcatcacc
tccgtggatactccgctgggtggcgattcagaaaaagcgctgctggatattctggccgat
gagaaagagaacggcccggaagacaccacgcaggacgatgatatgaagcaaagcatcgtc
aaatggctgttcgaactgaacgccaagcagcgtgaagttctggcgcgtcgtttcggtctg
ctgggttatgaagcagccacgctggaagatgtgggccgtgaaattggcctcacccgcgag
cgtgtgcggcagatccaggtggaaggtctgcgtcgcctgcgggaaattctgcaggggcag
gggctgaatatcgaagcgctcttccgcgaataa
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