Klebsiella variicola At-22: Kvar_1026
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Entry
Kvar_1026 CDS
T01170
Name
(GenBank) Sigma 54 interacting domain protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kva03000
]
Kvar_1026
Transcription factors [BR:
kva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Kvar_1026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
Mg_chelatase
AAA
AAA_5
MCM
GAF_3
AAA_2
AAA_19
DBD_HTH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADC56954
LinkDB
All DBs
Position
1079759..1081309
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AA seq
516 aa
AA seq
DB search
MSFSVDELARIAIDLQSDIGHTDRFSRLITTLRQILGCDASALLRYEAHQFVPLAIDGLA
QDVLGRRFALEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGHESLKVHACVGLPLFA
GQTLIGALTLDGMDADRFDSFSDEELRLIAALVAGALNNALLIARLEAQNVLPVQPVNDA
QPERQEIIGLSAPMLQLKKEIDIVAASDLNVLISGETGTGKELVAKAVHQGSTRAANPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLRQEVVEGRFRADLYHRLSVFPLSVPALRE
RENDVVLLAGYFCEQCRLRMGLARVILAEAARNRLQQWSWPGNVRELEHAIHRAVVLARA
TQAGDEVVLEPQHFQFAVAAPMLPTETAAAAPAIEKVNLREATDSFQREAISRALEANQR
NWAATARALELDVANLHRLAKRLGLKGSPPGKNSAG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgtcgacgagctggcgagaatcgccattgatttacaaagcgatattggt
cacaccgaccgcttttcgcgcctgattactaccctgcggcagatcctcggctgcgatgcc
tcggcgctgctgcgctatgaggcgcatcagtttgtgccgctggcgatcgatggcctggcg
caggatgtgcttggtcggcgctttgccctggaaggacacccgcggcttgaggcgattgcg
cgcgccggggatgtggtgcgcttcccggcggatagcgatttgcccgacccctatgacggg
ctgatccccggtcatgagagcctgaaggttcacgcctgcgttggcctgccgctgtttgcc
gggcagacgctgattggcgcgctgacccttgatggtatggatgccgaccgtttcgatagc
ttcagcgatgaagagctgcggctgattgccgcgctggtggctggcgccttgaataacgcg
ctgctcatcgcccgccttgaggcgcaaaatgtgttgccggtgcaaccggtgaatgacgcg
cagcctgagcgtcaggagattatcggcctgtcggcgcccatgctgcagctgaaaaaagag
atcgatatcgtcgccgcctcggatttaaacgtgctgatcagcggcgaaaccggcaccggg
aaagagctggtggcgaaggcggtgcaccagggatcgacgcgagccgccaatccgctggtc
tatctcaactgcgcggcgctgccggaaagcgtggcggagagcgagctgtttggccatgtg
aaaggggcgtttaccggggctatcagcaaccgcagcggtaaatttgagatggctgataac
ggcaccctgttccttgatgaaattggcgaactgtcgctggcgttgcaggcgaagctgctg
cgcgtgctgcagtatggcgatattcagcgcgtcggcgatgaccgcagtctgcgggtcgat
gtgcgggtgctggcggcgacgaaccgcgatctgcgccaggaggtggtggaagggcgcttt
cgcgccgatctgtaccatcgcctgagcgtcttcccgctgtcggttccggcgctacgcgaa
cgggaaaacgatgtggtgctgctggcgggctatttctgtgagcagtgccgcctgcggatg
gggctggcgcgggtcattttggctgaggcggcgcgaaacaggctgcagcagtggtcctgg
ccgggcaacgtgcgcgaactggagcatgctattcaccgggcggtggtgctggcgcgggcc
acccaggccggcgatgaagtggtgctggagccgcagcatttccagtttgcggtggctgcg
ccgatgttaccgactgagacggcggcagcggcacccgcgatagagaaggtcaatctacgc
gaggcgaccgactcttttcagcgggaagcgattagccgcgcgctcgaggcgaaccagcgc
aactgggcggcgaccgcccgtgcgctggaactggacgtcgccaacctgcatcggctggcg
aaacgtctgggacttaaaggatccccgcctggtaaaaattctgcaggttga
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