Klebsiella variicola At-22: Kvar_1078
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Entry
Kvar_1078 CDS
T01170
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kva03000
]
Kvar_1078
Transcription factors [BR:
kva03000
]
Prokaryotic type
Helix-turn-helix
Other families
Kvar_1078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
AAA_2
Mg_chelatase
HTH_30
HTH_psq
Xre-like-HTH
HTH_28
HTH_29
RsmI_C
AAA_3
IFR3_antag
AAA
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ADC57006
LinkDB
All DBs
Position
complement(1125564..1127351)
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AA seq
595 aa
AA seq
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MPGNPYLLAPEVNANPLLSDSWSRCQRYGLDPATEDFPRLRAGELADRLASHRSLQQLAQ
PVVDALSRQVADLQSVVVLSDPSGLVLHTVGDTQAMQKAQRVALAPGNLWSESGRGTNAI
GTALVIDDGCEIDGRQHFLTRNQNLYCAAMPLQRPDGSIAGVLDISGPADFPHQHTFGWV
KAAAKQIEYLWVKQSLHPEQWLMSLHRQVDKLDSVEELLLVFSDNVLTAGNRLAMREFGL
SAAQFGQLTFASLFPTLAQTAVSVPLPLTTPQGRYHYRLREPTRRRVAVSAPPVMHLPFT
SPREGEKLLRLLNAGIALCIEGETGSGKEYVSRTLHQHSRWRSGKFVAINCAAIPESLIE
SELFGYQPGAFTGASKNGYIGKIREAEGGVLFLDEIGDMPLALQTRLLRVLQEKEVAPLG
ASRSVPVNFALICATHRNLTQRVSAGEFREDLLWRLREYALALPPLREWPALETFIATLW
RDLGGVSRRVTLSGALLSHLSQLPWPGNVRQLQSVLKVMLALADEGDTLTPDALPEAYRT
APAPLPRGGLQAHDEQLIVDTLASVNGNVSRAAQILGIARSTLYRRAARTGRPRR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggtaatccctatcttctcgcaccagaggttaacgctaaccccctgctcagcgac
tcgtggtctcgctgccagcgctatggtctggatcccgctaccgaggattttccccgtctg
cgcgccggggagctggcagaccggctcgccagccaccgcagcctgcagcagctggcgcag
ccggtggtggatgccctgtcgcgccaggtggcggacctgcagtcggtggtggtcctctcc
gaccccagtggcctggtgctgcacaccgtcggcgatacccaggcgatgcagaaggctcag
cgcgtggcgctggcccccggcaatctgtggagcgaaagcgggcgcgggaccaacgccatt
ggcaccgcgctggtcattgatgacggctgcgaaatcgatggccgccagcattttcttacc
cgcaatcagaatctgtactgtgcggcgatgccgctccagcggccggacggaagtattgcc
ggggtgctggatatctccggcccggcggattttccccaccagcataccttcggctgggtg
aaggcggcggcaaagcagattgagtatctgtgggtgaaacagagcctgcatccggagcag
tggctgatgagcctgcaccggcaggtggacaagctcgacagcgtcgaggagctgctgctg
gtcttttctgacaacgtcctcaccgccggcaaccgactggcgatgcgcgagttcggcctg
agcgcggcgcagtttggccagctcacctttgcgtcgctttttccgacgctggcgcaaacg
gcggtcagcgtcccgctgccgctgaccaccccgcagggccgctatcactatcgcctgcgg
gagcccacccgccgccgggtggcggtgagcgccccgccggtcatgcatctccccttcacc
agcccgcgcgaaggcgaaaagctgctgcggctgctcaacgccggcatcgcgctctgtatt
gagggggaaaccggcagcggcaaagagtatgtcagccgcacgctgcatcagcacagccgc
tggcgcagtggcaaatttgtcgccatcaactgcgcggccatcccggaatcgctgatcgaa
tccgagctcttcggctaccagccgggggcatttaccggcgccagcaaaaacggctatatc
ggtaaaatccgcgaggctgagggcggggtactgtttctcgatgagatcggcgatatgccg
ctggcgctgcagacgcggctcctgcgggtgttgcaggaaaaagaggtggccccgctgggc
gccagccgcagcgtaccggtgaacttcgccttgatctgcgccacccaccgcaatctgaca
caacgggtcagcgccggcgaattccgtgaagatctgctgtggcgcctgcgggagtatgcc
ctggcgctgcccccgctgcgcgagtggccggcgctggaaacctttatcgccacgctgtgg
cgcgacctgggcggtgtttcacgccgggtgacgctgtcaggcgcgctgctgagccacctc
agccagctgccgtggccgggaaacgtgcgccagttgcagagcgtcctgaaggtgatgctg
gctctggccgatgagggcgacacgctgacgcccgacgcgctgccggaggcgtatcgcacc
gcgcctgcgccgctgccgcgcggaggattgcaggcccatgatgagcagttgattgtcgat
accctggccagcgttaacggcaacgtcagccgggcggcacagatactgggtatcgcccgc
agcacgctataccgccgcgccgcccgtaccggacggcctcgtcgctga
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