Klebsiella variicola At-22: Kvar_3044
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Entry
Kvar_3044 CDS
T01170
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kva03032
]
Kvar_3044
03400 DNA repair and recombination proteins [BR:
kva03400
]
Kvar_3044
Enzymes [BR:
kva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Kvar_3044
DNA replication proteins [BR:
kva03032
]
Prokaryotic type
DNA Topoisomerases
Kvar_3044
DNA repair and recombination proteins [BR:
kva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Kvar_3044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
LRV_FeS
DUF1722
Motif
Other DBs
NCBI-ProteinID:
ADC58930
LinkDB
All DBs
Position
complement(3173211..3175808)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSTDSTATKGAKKPK
KDERGALVNRMGVDPWHDWNAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDALPLQVIH
KDDKPFRPVSRDETMAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYISDNFGKKYLPESANQYASKEN
SQEAHEAIRPSDVSVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGDF
KLKARGRTLRFDGWTKVMPALRKGDEDRTLPVVKQGDRLSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMNY
DFTAQMEDRLDQVANHQAEWKEVLNHFFGDFTTQLETAEKDPEEGGMQPNPMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV
ASEKEGKATGWSAFFIDDKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgcgatttgccgaccagt
ggatcagcttccaaaaagagcaccgactctaccgccaccaaaggggctaaaaagcctaaa
aaggacgaacgtggtgctctggttaaccgcatgggcgtggacccatggcatgactggaat
gcgcactatgaagtacttccgggtaaagaaaaggtagtttcagaactcaaacagttggcg
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcggcggcgatgaacagcgttacagccgcgtggtgttcaat
gagatcaccaaaaacgctattcgtcaggccttcgaaaagccgggcgaactgaatatcgat
cgggttaacgcccagcaggcgcgccgctttatggaccgcgtggtgggctatatggtctcg
ccgctgctgtggaagaaaattgcccgtggtctttctgccgggcgcgtgcagtccgttgcg
gtccgcctggtggtggaacgtgagcgtgaaatcaaagccttcgtcccggaagagtactgg
gaagttgatgccagcaccaccacgccaggcggcgacgcgctgcctctgcaggtgatccat
aaagacgataagccgttccgtccggtcagccgtgatgagaccatggcggcggtatcgctg
ctggaaaaagccagctacagcgtgctggagcgagaagacaagccgaccagcagcaagccg
ggcgcgccgttcatcacctccacgctgcagcaggcggccagcacccgtctcggcttcggc
gtgaaaaagaccatgatgatggctcaacgtctctatgaggcggggcacatcacctatatg
cgtaccgactccaccaacctgagtcaggacgcgctgaacatggttcgcggttatatcagc
gacaactttggcaaaaaatatctgccggagagcgctaaccagtacgccagcaaagaaaac
tcgcaggaagcgcacgaagcgattcgtccttctgatgtgagcgtgctggcggaaacgctg
aaagatatggaagccgatgcgcagaagctctatcagctgatctggcgccagtttgtcgcc
tgtcagatgacgccggcgcaatacgattccaccacgctgaccgtggcggcgggcgatttc
aaactgaaagcacgcggtcgtaccttacgtttcgacggctggaccaaagtcatgccggcg
ctgcgcaagggcgatgaagaccggacgctaccggtggtcaaacagggcgaccgcctgagc
ctggtggagctgacgcctgcgcagcactttaccaagccgccggcgcgcttcagcgaagct
tcactggtcaaagagctggaaaaacgcggcatcggccgtccttccacctacgcttcgatc
atctcgaccattcaggatcgcggctacgtgcgggtggaaaaccgtcgtttttacgcggag
aaaatgggcgaaatcgtcaccgatcggctggaagaaaacttccgcgatctgatgaactac
gacttcaccgcgcagatggaagatcgtctcgaccaggtggccaaccaccaggccgagtgg
aaagaggtgctgaaccacttcttcggcgattttaccactcagctggagaccgcagagaaa
gatccggaagagggcggcatgcagccgaacccgatggtgcttaccagcatcgactgcccg
acctgtggacgtaaaatgggcatccgtaccgccagcaccggtgttttcctcggctgttcg
ggctatgctctgccgccgaaagagcgttgcaaaaccaccatcaacctggtgccggaaaac
gaagtcctcaacgtgctggaaggcgatgacgcggaaaccaacgcgctgcgtgccaaacgt
cgctgtcagaagtgcgggaccgcaatggacagctaccttatcgatcctaagcgtaaactg
cacgtgtgtggtaataacccgacctgtgacggctatgagattgaagaaggcgagttccgc
atcaagggctatgacggtccggtagtggagtgcgagaagtgcggttctgaaatgcacctg
aaaatggggcgtttcggcaagtacatggcctgtaccaacgacgagtgtaagaatacgcgt
aagatcctgcgcaacggcgaagtggctccgccgaaggaagatccggtgccgctgccggag
ctgccgtgcgagaagtctgacgcgtactttgtgttgcgcgacggggcggcgggtgtcttc
ctggcggccaacaccttcccgaaatcacgggaaacgcgtgcgccgctggtggaagagctg
taccgcttccgcgatcgtctgccggaaaaactgcgctatctcgccgatgcgccgcagcag
gatccggaaggtaataaaacgctggtgcgctttagccgtaaaacgaaacagcagtatgtg
gcttccgaaaaagagggtaaagcgaccggctggtcagccttctttattgacgataaatgg
actgaagccaaaaagtaa
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