Klebsiella variicola At-22: Kvar_3979
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Entry
Kvar_3979 CDS
T01170
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kva03032
]
Kvar_3979
03036 Chromosome and associated proteins [BR:
kva03036
]
Kvar_3979
03400 DNA repair and recombination proteins [BR:
kva03400
]
Kvar_3979
DNA replication proteins [BR:
kva03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Kvar_3979
Chromosome and associated proteins [BR:
kva03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Kvar_3979
DNA repair and recombination proteins [BR:
kva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Kvar_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ADC59858
LinkDB
All DBs
Position
complement(4192333..4192605)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgattgacaaaattgctgcgggtgcggacatttctaaagctgca
gctggacgtgcgttagatgctttaatcgcttctgttactgaatctctgcaggctggggat
gacgttgcgctggtaggttttggtacctttgctgttaaagaacgtgccgcccgtactggt
cgcaacccacaaacaggtaaagaaattactatcgctgccgcaaaagtgccgggcttccgt
gctggtaaagcgctgaaagacgcggtgaactga
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