Klebsiella variicola At-22: Kvar_4043
Help
Entry
Kvar_4043 CDS
T01170
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kva03400
]
Kvar_4043
DNA repair and recombination proteins [BR:
kva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Kvar_4043
Archaeal homologous recombinant proteins
Kvar_4043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
AAA_15
cobW
ABC_ATPase
Endonuc_subdom
AAA_22
DUF87
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADC59922
LinkDB
All DBs
Position
4259102..4262239
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFVSNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQSQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCA
DGKILADKVSDKLEQTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVYEQHKAARHALEKFEAQAAGIVLLTEAQQQALQESLQVLTDEEKTLLTQQQ
NQQQQLQWLTRCDELAQQHQQAVSRQQQARQALTDAAPALAKLELAQPAAQLRPLWERQQ
EQVAGLAQTRQRINEVNARLLACTAQRARIRRSALHAQQQRQAELTDLAQWLAAHDRFRL
WGQEIAGWRAQFSQLTRDKQQLTAQTTRLAALRQKLSALPASSLSLSAEEVAAAMAQQTQ
SRPLRQRLLSLHEQHQQLHKRLRQSAENIQQAQTEQAKLNATLTQRREQYKDKNQHYLDL
KALCQREETIKDLEGYRARLEAGKPCPLCGSCEHPAIEQYTSLTVTDNQRRRDALEKEVA
ALKEEGLLVLGQVNALTQQLQRETEAARRLTEEEQALTKAWQETCAALQVTRDIAQEIND
WMQEQERYEQQLYQLSQRLMLQSQLNDQQALERQAHQQLETTRQGLENALQTLSLSLPEE
GAEAAWLHARESEFARWQAQQTRHGVLQEQIAALKPLLDTLPPGDEDDAEAEPVIPDNWR
EIHEECLSLHSQLVAQQQLETEETARVHQSQTQFTTALAASRFNDLEAFLAALLDDETAQ
RLTQLKQSLEQQLQQATVLCEQATQQQQAHLALRPQGSDADGPTLQTQLHALAQRLRDNT
TRQGEIRQQLRQDNESRQQQQALGQQIAEAAQLADDWGYLNSLIGSSTGDRFRKFAQGLT
LDNLVWLANQQLNRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKER
IPVQIKVKKINGLGYSRLDRVFAVE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgtctgaaaaacctcaactccctgaagggtgaatggaagata
gactttaccgccgagccgttcgtcagcaacggcctgttcgccattaccggcgccaccggc
gccggcaaaaccaccctgctcgatgccatttgcctggcgctttatcacgagacgccgcgc
ctgaataaagtttcccagtcgcaaaatgacctgatgacccgcgataccgccgaatgtctg
gcggaagtcgagtttgaagtcaaaggcaccgcctaccgcgctttctggagccagaaccgg
gcacgcaaccaaccggatggcaatctgcaggcgccccgcgtcgagctggcacgctgcgcc
gacggcaaaatcctcgccgataaggtctcggacaaactggagcaaaccgcgacgctcacc
gggctagactatggccgtttcacccgctcgatgctgctttcccagggacaatttgccgcc
ttcctgaacgcgaagccgagcgatcgcgcggagctgctggaggagctgaccggcacggaa
atctacggccagatttcggccatggtctacgaacagcacaaagctgctcgccacgcgctg
gagaagttcgaagcccaggcggcgggcatcgttctgctgacggaagcgcagcagcaggcg
ctgcaggaaagtttgcaggtactcactgacgaagaaaaaaccctgctaacgcagcagcaa
aaccagcaacagcagcttcagtggctgacgcgctgcgacgagctggcgcagcagcaccag
caggcggttagccggcagcagcaggcccgccaggcgctgaccgacgccgccccggcgctg
gcgaagcttgagctggcccagccggccgcccaactgcgccccctgtgggagcgtcagcag
gaacaggtggcaggtctggcgcaaacccggcaacggatcaacgaagtaaatgctcgctta
cttgcctgcaccgcgcagcgcgcgcgcatccgccgcagcgccctgcacgctcagcagcag
cgtcaggctgaactgacggacctggcgcagtggctggcggcccatgaccgattccgctta
tggggacaggagattgccggctggcgggcgcaattctcgcaactgacgcgcgataaacag
cagctaacggctcagaccacccgcctggccgcgctgcgccagaaactaagcgctctgccg
gccagctccctgtcattgtccgcagaggaagtcgcggcggcgatggcgcagcaaacgcaa
tcgcggccgctgcgccagcggctgctctccctgcatgaacagcatcagcagttgcacaaa
cgcctgcggcagagcgccgagaacatccagcaggcgcaaacggagcaggcaaaactcaat
gccaccctgacgcaacgtcgggagcaatataaagacaaaaaccagcactatctcgacctg
aaggcgctctgccagcgggaagaaacgattaaagatctggaaggttaccgcgcccggctt
gaggcggggaagccctgcccgctttgcggctcctgtgaacatccggcgattgagcaatac
acctcgctaacggtcacggataatcagcgccgccgcgacgcgctggaaaaagaggtcgcc
gcgctgaaagaagaaggtctgctggtcctcgggcaggtcaacgccctgacgcagcagctc
cagcgtgagaccgaagcggcccggcggctcacagaggaagagcaagcgctcactaaagcg
tggcaggaaacctgcgccgctctgcaggtcacgcgggatattgcgcaagagataaacgac
tggatgcaggagcaggagcgctacgagcagcagctctatcagctcagccagcgtctgatg
ttacagagccagctcaacgaccagcaagcgctggagcgccaggctcaccagcagctggag
accacgcgccaggggctggagaacgccctgcagacgctgtcgctcagcctgccggaagaa
ggcgcagaagccgcctggctgcacgctcgcgaaagcgaatttgcccggtggcaggcgcaa
cagacgcggcatggcgtgctccaggagcagatcgccgccctgaaaccgctgctcgatacg
ctgccgcccggcgatgaggatgacgcggaggctgagccggtgatcccggacaactggcgc
gaaatccacgaggaatgcctgtcgctgcacagccagcttgtcgcccagcagcaactggag
accgaagaaacggcgcgcgtacatcagtcacagacgcaattcacgactgccctggccgcc
agccgcttcaacgatctggaggcgttcctcgccgcactgctggatgacgagaccgcccag
cggctgacgcagttaaaacagtcgcttgagcagcagcttcagcaagcgacggtgctctgc
gagcaggcgactcagcagcaacaggcgcatctggcgctgcggccgcaaggatcagacgct
gacggccccaccctgcaaacgcagctgcacgccctggcccagcggctgcgggacaacacg
acccgtcagggtgagatccgccagcagctcaggcaggataatgaaagccgccagcagcag
caggcgctggggcagcagattgcagaggcggcgcagctggcggacgactggggctatctg
aattcgctgatcggctccagcaccggcgaccggttccgcaaattcgcccaggggctgacg
ctggataatctggtctggctggcaaaccagcagctcaaccgcctgcacggccgctatctg
ctgcaacgcaaggccagcgaggcgctggagctggaggtggtcgatacctggcaggccgac
gccgtgcgcgacacccgcactctctccggcggcgaaagtttcctcgtcagcctggcgctg
gccctggcgctgtcagacctggtgagccataaaacacggattgactccctgtttctcgat
gaaggctttggcaccctcgacagcgaaacgctggatacggcgctggacgccctggatgcc
cttaacgccagcggcaaaattatcggggtgatcagccacgtggaggcaatgaaggaacgt
attccggtgcagatcaaagtgaagaagataaatggcctgggctacagtcggctggacaga
gtgtttgcggtggagtga
DBGET
integrated database retrieval system
