Klebsiella variicola At-22: Kvar_4235
Help
Entry
Kvar_4235 CDS
T01170
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kva03016
]
Kvar_4235
Enzymes [BR:
kva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Kvar_4235
Transfer RNA biogenesis [BR:
kva03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Kvar_4235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADC60112
LinkDB
All DBs
Position
4469861..4470397
Genome browser
AA seq
178 aa
AA seq
DB search
MSEPKRLFFALELPSAVQKQIVQWRASHFPEDAGRPVAADNLHLTLAFLGEVSAEKQRAL
AALAGRLRQPGFTLTLDDAGQWLRSRVVWLGTRQPPRGLLQLASMLRAQAARSGCYQSPQ
PFHPHITLWRDARQAVPIPAPGFHWSFPVNEFVLYESSFGRGRTRYTALERYPFHKES
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgaaaaggctgttttttgcgcttgaactgccgtctgccgtccagaaacag
atcgtccagtggcgggcaagccacttccccgaggatgccggcaggcccgtcgcggcggat
aacctccatctgacgctggcgtttctcggcgaggtgagcgcggaaaaacagcgggcgctg
gccgccctcgccggccgcctccgccagccgggctttaccctgacgctggacgatgccgga
cagtggctgcgctcgcgggtggtctggctcgggacccgtcagccgccgcgcggcctgctg
cagctcgccagtatgctgcgcgctcaggcggcgcgcagcggctgctatcagagcccgcag
ccgtttcatccgcatattaccctgtggcgcgatgcccgccaggcggtgccgatcccggct
cccggctttcactggtcgtttccggtgaacgagttcgtgctttatgagtccagcttcggc
cgggggcgcacgcgctacacggcgctggaacgttatccgtttcataaggaaagttga
DBGET
integrated database retrieval system
