Klebsiella variicola At-22: Kvar_4602
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Entry
Kvar_4602 CDS
T01170
Name
(GenBank) transcriptional regulator, LacI family
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
kva
Klebsiella variicola At-22
Brite
KEGG Orthology (KO) [BR:
kva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kva03000
]
Kvar_4602
Transcription factors [BR:
kva03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Kvar_4602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_31
HTH_23
HTH_3
HTH_IclR
HTH_7
MarR_2
Peripla_BP_4
AAA_18
HTH_Tnp_ISL3
HHH
HTH_Crp_2
MarR
TrmB
HTH_28
HTH_26
CENP-B_N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADC60474
LinkDB
All DBs
Position
4888634..4889581
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMQQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPGLVEEHLGMLARRNID
GVVLFGFTGIDEAMLAPWRDTLVLMARDAPGFASVCYDDEGAITLLMQRLYDRGHRHISF
LGVPHSDVTTGERRHLAYLAFCKKHRLTPTAALPGLGMKQGYDTVASVLTAETRALVCAT
DTLALGASKYLQQQGRAALQLASVGSTPLMKFLHPEILTVDPGYAESGRRAARQLIEQIA
GSVEPRQIVIPAALN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccggctgaccatcaaagatatcgcgcgtttaagcggcgtaggaaaatcgacg
gtatcccgcgtccttaacaacgagagcggggtcagcgaacggacccgcgagcgcgtcgaa
gcggtgatgcagcagcacggtttctcaccctcccgctccgcccgcgccatgcgcggccag
agcgataaagtggtggcgattatcgttacccgtctggattccctgtcggaaaaccttgcc
gtgcagaccatgctgcccgccttttatgaacagggttacgatccgattatgatggagagc
cagttctccccgggactggttgaagagcatctcggcatgctcgcccggcgtaatattgac
ggcgtagtgctgttcggatttaccggcattgatgaggcgatgctcgccccctggcgcgat
acgctggtgctgatggcccgcgacgcccccggtttcgcctcggtgtgctatgacgacgaa
ggcgccatcacgctgctgatgcagcggctctacgatcgcggacatcgccacatcagtttt
cttggcgtcccgcacagcgacgtcaccaccggcgaacgccgccatctcgcctacctcgct
ttctgtaaaaagcatcgcctgacgcccaccgccgctctgccgggcctgggcatgaagcag
gggtatgacaccgtcgccagcgtgctgacggccgaaaccagagccctggtctgcgcgacg
gataccctcgccctcggcgccagcaagtacctccagcagcagggccgcgctgcgctgcag
ctcgccagcgtcggtagcacgccgctaatgaagtttctccacccggaaatcttgaccgtc
gatcccggctatgccgagtccggacgccgggccgcccggcagttgatcgagcagatcgcc
ggcagcgtcgaaccccgccagatcgtgattcccgccgccctgaattaa
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