KEGG   Klebsiella variicola At-22: Kvar_4947
Entry
Kvar_4947         CDS       T01170                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
kva  Klebsiella variicola At-22
Pathway
kva03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kva00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kvar_4947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kva03019]
    Kvar_4947
Enzymes [BR:kva01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Kvar_4947
Messenger RNA biogenesis [BR:kva03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Kvar_4947
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CCDC138_C ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ADC60818
LinkDB
Position
5279499..5280764
AA seq 421 aa
MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRARPGNGPRRNGPPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccggcagtc
attgaagcccttgaaaagaaagggtttcataattgcacacccattcaggccctcgccctt
ccgctgacgctggaaggccgcgatgtcgccgggcaggcgcaaaccggtaccggtaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcacccggctatcgccgatcgc
caggttaaccaaccgcgcgcgctaattatggcaccaacgcgtgaactggcggtacagatc
cacgcggatgctgaaccgctggcgcaggccaccggtctgaagctgggtctggcttacggc
ggcgacggctacgacaagcagctgaaagtgctggaaagcggtgtcgatattctgatcggt
accactggtcgtctgatcgattacgcgaaacagaaccacattaacctcggcgccattcag
gtcgtcgtactggacgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgcatgccgccggcgacgcagcgcctgaacatgctgttctccgcgact
ctttcttatcgcgttcgcgaactggcgttcgagcagatgaacaacgccgaatatgtcgaa
gtggaaccggaacagaaaacgggccaccgtattaaagaagagctgttctacccttccaac
gaagaaaaaatgcgcctgctgcagacgctgctggaagaagagtggcccgatcgcgccatc
atcttcgccaacaccaagcaccgttgtgaagatatctggggtcatctcgccgctgacggc
catcgtgtaggtctgctgaccggcgacgtggcgcagaaaaagcgtctgcgtattctcgac
gaatttactcgtggcgatctcgatattctggtcgcaactgacgttgctgcgcgcggctta
catattccggccgtgacccacgtctttaactacgatctgccggacgactgcgaagattac
gttcaccgcatcggccgcaccggccgcgctggcgccagcggcaactctatcagcctcgcc
tgcgaagagtacgcgctgaacctgccggcaatcgaaacctatattggtcactcgatcccg
gtcagtaagtacaacccggacgcgctgatgaccgacctgcctaagccgctgcgtctgacc
cgtgcgcgcccaggcaacggcccgcgccgcaacggtccaccgcgcaatcgtcgtcgttca
ggttaa

DBGET integrated database retrieval system