Klebsiella variicola DX120E: KR75_05600
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Entry
KR75_05600 CDS
T03531
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
kvd
Klebsiella variicola DX120E
Pathway
kvd02020
Two-component system
kvd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kvd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KR75_05600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KR75_05600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvd03021
]
KR75_05600
Transcription machinery [BR:
kvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KR75_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJA94326
UniProt:
A0A087FVZ6
LinkDB
All DBs
Position
complement(525002..526435)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEVEAKE
VEDRESLDTVDALEQKEMPDELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQTL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTIQIEDIVDSIGDDEIGLEEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFAKETPWLEEARLIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIHTSEPEYVIPDVLVRKVSGRWTVELNADSIPRLKIN
QQYAAMGNSARNDADGQFIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaggcttagccaacagcttgccatgacgccgcaactgcag
caggctattcgtttgctgcagttgtccacgttagaactccagcaagagctccagcaagcg
ctggaaagtaacccattgcttgagcaaaccgatcttcacgacgaggtagaggcgaaagaa
gtggaggaccgcgagtccctcgataccgtcgatgcgcttgagcaaaaagagatgccggac
gagctccctctcgatgccagctgggatgaaatctataccgccggtacgccgtcaggcaac
ggcgtggattatcaggacgacgagctgcccgtctatcaaggcgaaaccactcagacgctg
caggattatctgatgtggcaggtcgagctgacgcccttcaccgacactgaccgcgccatt
gccacctccatcgtcgacgccgtcgacgatacgggctatctcaccattcagattgaagac
atcgtcgacagcattggcgatgacgaaatcggcctggaagaggtggaggccgttctgaag
cgcatccagcgttttgatccggttggcgtcgcggcgaaagatctgcgcgactgcctgctg
atccagctgtcgcaattcgctaaagagacgccgtggctggaagaggcccggttgattatc
agcgaccatctcgatctgctggctaaccacgatttccgcaccctgatgcgagtaacgcgc
ctgaaagaagaggtgctgaaagaggcggtgaatctgatccagtcgctggatccccgccct
ggccagtccattcataccagtgaaccggaatatgtcattcccgacgtactggtccgcaag
gtcagtggccgctggaccgtggagctcaacgccgacagcattccccggctgaagattaat
cagcaatatgcggcaatgggcaacagcgcccgcaatgacgccgacggccagttcattcgc
agcaatctccaggaagcccgctggctaatcaaaagtctcgaaagccgcaacgatacgctg
ctgcgcgtcagccgctgcatcgttgaacagcagcaggcttttttcgaacagggtgaagag
tatatgaagccgatggtgctggccgatatcgcccaggctgtcgagatgcatgaatccacc
atttcccgtgtcaccacgcaaaaatatctgcacagtccgcgcggtatttttgaactgaag
tatttcttctccagccatgtgaataccgaaggcggcggcgaagcctcgtcgacggccatt
cgcgcgttggtgaagaagttaatcgccgcggaaaaccccgcgaagccgttgagcgacagt
aagctcacctccatgctgtccgagcagggtatcatggtcgcgcgccgcactgtcgcgaag
tacagagagtctttatccattccgccgtcaaaccagcgtaaacaactggtctga
DBGET
integrated database retrieval system