KEGG   Klebsiella variicola DX120E: KR75_08935
Entry
KR75_08935        CDS       T03531                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
kvd  Klebsiella variicola DX120E
Pathway
kvd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kvd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KR75_08935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kvd03019]
    KR75_08935
Enzymes [BR:kvd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KR75_08935
Messenger RNA biogenesis [BR:kvd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KR75_08935
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AJA94961
LinkDB
Position
5319739..5321004
AA seq 421 aa
MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNRINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRARPGNGPRRNGPPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccggcagtc
attgaagcccttgaaaagaaagggtttcataattgcacacccattcaggccctcgccctt
ccgctgacgctggaaggccgcgatgtcgccgggcaggcgcaaaccggtaccggtaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcacccggctatcgccgatcgc
caggttaaccaaccacgcgcgctaattatggcaccaacgcgtgaactggcggtacagatc
cacgcggatgctgaaccgctggcgcaggccaccggtctgaagctgggtctggcttacggc
ggcgacggctacgacaagcagctgaaagtgctggaaagcggtgtcgatattctgatcggt
accactggtcgtctgatcgattacgcgaaacagaaccgcattaacctcggcgccattcag
gtcgtcgtactggacgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgcatgccgccggcgacgcagcgcctgaacatgctgttctccgcgact
ctttcttatcgcgttcgcgaactggcgttcgagcagatgaacaacgccgaatatgtcgaa
gtggaaccggaacagaaaacgggccaccgtattaaagaagagctgttctacccttccaac
gaagaaaaaatgcgcctgctgcagacgctgctggaagaagagtggcccgatcgtgccatc
atcttcgccaacaccaagcaccgttgtgaagatatctggggtcatctcgccgctgacggc
catcgtgtaggtctgctgaccggcgacgtggcgcagaaaaagcgtctgcgtattctcgac
gaatttactcgtggcgatctcgatattctggtcgcaactgacgttgctgcgcgcggctta
catattccggccgtgacccacgtctttaactacgatctgccggacgactgcgaagattac
gttcaccgcatcggccgcaccggccgcgctggcgccagcggcaactctatcagcctcgcc
tgcgaagagtacgcgctgaacctgccggcaatcgaaacctatattggtcactcgatcccg
gtcagtaagtacaacccggacgcgctaatgaccgatctgcctaagccgctgcgtctgacc
cgtgcgcgcccaggcaacggcccgcgccgcaacggtccaccgcgcaatcgtcgtcgttca
ggttaa

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