Klebsiella variicola DX120E: KR75_12530
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Entry
KR75_12530 CDS
T03531
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kvd
Klebsiella variicola DX120E
Brite
KEGG Orthology (KO) [BR:
kvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvd03019
]
KR75_12530
Enzymes [BR:
kvd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KR75_12530
Messenger RNA biogenesis [BR:
kvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KR75_12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
HA2_N
Cas3-like_C_2
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AJA95639
LinkDB
All DBs
Position
complement(4545572..4548001)
Genome browser
AA seq
809 aa
AA seq
DB search
MSSLPVAAVLPELLSALQHAPQVLLNAPTGAGKSTWLPLQILAEGNIAGRIILLEPRRLA
ARNVAQRLAELLGEKPGETVGYRMRAETCVGPQTRLEVVTEGILTRMIQRDPELAGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDCLQRLLPEAPVVVSEGRA
YPVERRFNPLPTHQRFDEAVAVAAAELLRHEQGSMLLFLPGVGEIQRVQEQLTERVAEDV
ILCPLYGALPLSEQRKAILPAPAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDP
RTGLTRLVTQRISQASMTQRAGRAGRLSPGICLHLLGKEQAERAAAQSEPEILHSDLSAL
LLELLQWGCHDPAALAWLDQPPAVNLAAARRLLEALSALDGERLSAFGRKMATLGNEPRL
AAMLAAAQTDDEAATAARLAAILEEPPRGGLVDLGAVFSRQQTNWQQRAQQLMKRLARRG
GQPDAEGMAELLASAFADRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQG
SASPDARMLLALPVDIGELIAARPELAQRSDTVEWDEAQGTLKAWRRTVIGQLVIKTQPL
AKPSEAELHQAMLNGIREKGLGVLNWTPEAEQLRLRLQCAAQWLPEEAWPAVDDASLLAS
LEAWLLPQMNGVHSLRALKALDLRQALQDWLPWPLRQKLDRELPTHYTVPTGSRLAIRYH
AENPPALAVRMQEMFGEATTPVIAEGRVPLVLELLSPAQRPLQITRDLSAFWQGSYREVQ
KEMKGRYPKHVWPDDPANTAPTRRSKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggttgccgccgtcctcccagaactgttatccgccctgcagcacgcg
ccgcaggttttgctcaacgcgccgaccggcgccgggaaatcgacctggctgccgctgcag
atcctcgccgagggcaacatcgcgggacgcattatcctgctggagccgaggcgcctggcg
gcgcgtaatgtcgcgcagcggctggctgaactgcttggcgaaaagccgggggagaccgtg
ggttaccgcatgcgcgccgaaacctgcgtcgggccgcagacccgcctggaggtggttacg
gaggggatcctgacgcgcatgatccagcgcgatccggagctggcgggtgtggggctggtg
atcctcgatgagtttcacgagcgtagcctgcaggcggatctggcgctggccttgctgctc
gacgtccagcagggattgcgtgacgatctcaagctgctgatcatgtcggcgaccctcgat
aacgattgcctgcagcgtctgctgcctgaggcgccagtggtggtctcggaggggcgcgct
tatccggtggagcgccgtttcaacccgcttcccacgcaccagcgctttgatgaggcggtg
gcggtggcggcagcggagctgttgcgacatgagcagggatcgatgctgctgtttctgccc
ggcgtcggtgagatccagcgcgttcaggaacaactgacggagcgcgtggcggaggatgtc
atcctctgcccgctgtacggcgcgctgcccctaagcgagcagcgcaaagcgatcctcccg
gcgccggccgggaagcgcaaagtggtgctggccaccaatatcgccgagaccagtctgacc
atcgaggggatccgcctggtggtcgacagtgcccaggagcgggtcgcccgctttgacccg
cgcaccggcctgacccggctggtaacgcagcgcatcagccaggcatcgatgacgcagcgt
gccggacgcgccggtcgtctctctccggggatctgcctgcatttgctcggcaaagaacag
gcggaacgggcggcggcgcagagcgagccggagatcctgcacagcgatctgtcggcgcta
ctgctggagctgctgcagtggggctgccacgatccggccgcgctggcctggctggatcag
ccgcccgcggtgaacctggccgccgcgcgccgcctgctggaggcgctctcggcgctggac
ggcgagcggctgtcggcgtttggccgcaaaatggcgaccctcggcaacgagccccggctg
gcggcgatgctggccgccgcgcagaccgatgacgaggcggcgacggcggccaggctggcg
gcgatccttgaggagcctccgcgcggcgggctggtggatttgggcgccgtcttttcccgt
cagcagaccaactggcagcagcgggcgcagcagctgatgaagcgtctggcccgccgcggc
ggccagcccgatgccgaaggaatggcggagttgctggcgtcggccttcgccgatcgcatc
gcccgccgccgcggtcaggaggggcgctaccagctggcgaacggcatgggcgcgatgttg
gacgccgacgacgcgctgggccgccatgagtggctgatcgctccgctgctgctgcagggc
agcgcctcgccggatgcccgcatgctgttggctctgccagtggatatcggcgagctgatc
gccgcccgtcccgagctggcgcagcgttccgacacggtggagtgggatgaagcgcagggg
acgctgaaagcctggcggcggacggtgataggccagttggtgatcaagacccagccgctg
gcgaagccctctgaggcggagctgcatcaggcgatgctcaacggtattcgtgagaaaggc
ctcggtgtgctcaactggacgccagaggctgagcagctgcgactgcggctgcagtgtgcg
gcgcagtggttgccggaagaggcgtggcccgcggtggatgacgcttcgctgttggcctcg
ctggaggcatggctgctgccgcagatgaacggcgttcactcgctgcgggcgctgaaggca
ctggatctgcgtcaggcgctacaggactggctgccgtggccgctgcgccagaagctggat
cgcgagctgccgacgcactataccgtgccgaccggcagccgtctggcgatccgttaccat
gcggagaacccgccagcgctggcggtacgtatgcaggagatgttcggcgaggcgacgacg
ccggttatcgccgaggggcgggtgccgctggtgctggagctgctgtcgcccgcccagcgt
ccgctgcagatcacccgcgatctgagcgccttctggcagggaagctaccgcgaggtgcaa
aaagagatgaagggacgctacccgaaacacgtctggccggacgatccggccaacaccgcc
ccgacccggcgcagcaaaaaatattcgtag
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