Klebsiella variicola DX120E: KR75_19000
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Entry
KR75_19000 CDS
T03531
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kvd
Klebsiella variicola DX120E
Brite
KEGG Orthology (KO) [BR:
kvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvd03016
]
KR75_19000
Enzymes [BR:
kvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KR75_19000
Transfer RNA biogenesis [BR:
kvd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KR75_19000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AJA96862
UniProt:
A0A7H0EGA8
LinkDB
All DBs
Position
3197856..3199790
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYAESTADGKLLLTVAIADPTAWIAEGSK
LDKAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSDAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHIDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDDATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagatcgcgaaagcgccgaaccagaaaccctggttgag
ccgttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgccgagatgcgccgtcatccgttaaaaggcgac
cgcgggttttacgcggagctgacccagttcatcaccttcagcgacgatcacttcgtcccc
tggtgggtaaccctggcgcgccataacctcgaaaaagaagcgccggacggcgtggccacg
gaaatgctcgatgaagggctgacgcgccgcgatttaaccgctctcgacttcgtcactata
gacagcgccagcactgaagatatggacgatgcgctgtatgccgaatccactgctgatggc
aaactgctgctgacggtcgccattgctgacccgaccgcctggattgccgaaggtagcaag
ctggataaggccgcaaaagtgcgcgcctttaccaactatctgccgggcttcaatattccg
atgctgccccgcgagctgtcagacgacctgtgctccctgcgcgctaacgaagtgcgcccg
gtgctggcctgccagatgactctggcggccgatggcaccatcgaagacaacatcgaattc
tttgccgccaccatcgagtcgaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgacgcgatcgcgcagcaaattacactgttg
aaggacgtgtgccagcgtcgtagcgaatggcgtcagacccatgcgctggtgttcaaagac
cgtccggactaccgtttcgttcttggcgaaaaaggcgaagtgctggatatcgtcgcggaa
ccacgtcgcattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgttctgcgcgacaagctcggcttcggcgtttataacgtccataccggcttcgac
ccggcgaataccgaacagctggcggcgctgctgaaaacccacgacgtgcacatcgacccg
acggaggtgctgacgctggaagggttctgcaagctgcgccgggaactggacgcccagccg
accggattcctcgacagccgcatccgccgcttccagtcgtttgcggaaatcagcaccgag
ccaggcccgcactttggcctcggccttgaggcctatgccacctggacctcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgagaccatt
gcgcgcccgcaggatgatgccaccgtacagatggcggagcgccgtcgtcttaaccggatg
gcagagcgcgacgtcgccgactggctgtatgcccgtttcctcaacgataaagccgggacc
gatacccgttttgcggcggagatcatcgacatcagccgcggcgggatgcgcgtgcgcctg
gtggacaatggcgcggtcgcctttattccggcccccttcctccacgccgttcgcgacgaa
ctggtgtgcagccaggagaacggcaccgtgcagatcaagggcgaggtggtctacaaagtg
actgacgttatcgatgtcaccatcgccgaagtccgcatggaaacccgcagcattattgcg
cgtccggcagtctga
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