Ketogulonicigenium vulgare WSH-001: KVU_0158
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Entry
KVU_0158 CDS
T01909
Symbol
rnc
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KVU_0158 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvl03019
]
KVU_0158 (rnc)
03009 Ribosome biogenesis [BR:
kvl03009
]
KVU_0158 (rnc)
03036 Chromosome and associated proteins [BR:
kvl03036
]
KVU_0158 (rnc)
Enzymes [BR:
kvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KVU_0158 (rnc)
Messenger RNA biogenesis [BR:
kvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KVU_0158 (rnc)
Ribosome biogenesis [BR:
kvl03009
]
Eukaryotic type
90S particles
RNase
KVU_0158 (rnc)
Prokaryotic type
rRNA processing factors
KVU_0158 (rnc)
Chromosome and associated proteins [BR:
kvl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KVU_0158 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AEM39997
UniProt:
F9Y8I8
LinkDB
All DBs
Position
complement(171779..172444)
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AA seq
221 aa
AA seq
DB search
MDFADRLGHRFINTEVLMRALTHGSASSPDRSDNQRLEFLGDRVLGLVVAEALLAADKFA
TEGQIAPRFNRLVRRETCAEVARAMDLGAALRIGRSEMKTGGRKKEAVLADAMEAVIAAV
YLDAGFDAAKSVVLKHWAAHIANVDDDARDAKTALQEWAQGRGETPPAYIEEARSGPDHA
PIFTVRVTLQSGPTATGEAGSKRLAEHAAATKLLQEVSQND
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgccgaccgcctcggccatcggttcatcaataccgaagtgctgatgcgcgcc
ctgacgcatggctctgcctcctcgcccgaccgctcggacaaccaacgtctcgagtttttg
ggcgaccgcgttttgggccttgtcgtggccgaggcgctgctggcggcggataaattcgca
accgaaggccagatcgccccgcgcttcaaccgccttgtacggcgcgaaacctgtgccgaa
gtggcccgtgccatggatctgggcgcggcgctgcgcattggccgctcggaaatgaagacc
ggcgggcgcaagaaagaagccgtgctggccgatgcgatggaggcggtgatcgccgccgtt
tatctagacgcaggctttgacgccgccaagtcggtggtgctgaaacactgggccgcgcat
atcgccaatgtcgatgatgatgcgcgcgacgccaagaccgccctgcaagaatgggcgcaa
ggtcgcggcgagacaccccccgcctatatcgaagaggcccgctccggccccgatcacgcg
cctatcttcaccgtgcgcgtcacgctacaatccggcccaacggccacgggcgaggccggt
tccaaacgccttgccgaacatgctgcggcgacaaagctgctacaggaagtatcgcaaaat
gactga
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