Ketogulonicigenium vulgare WSH-001: KVU_0346
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Entry
KVU_0346 CDS
T01909
Symbol
rpoH1
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvl03021
]
KVU_0346 (rpoH1)
Transcription machinery [BR:
kvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KVU_0346 (rpoH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
AEM40185
UniProt:
F9Y9T3
LinkDB
All DBs
Position
390935..391831
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AA seq
298 aa
AA seq
DB search
MSTYTNLPAPSPEQGLSRYLQEIRKFPMLEPEQEYMLARNWVDHGDTQAAHKLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEEGDLRPEHVQRIAHDLGVPEEEVVNMNRRL
SGGDASLNAMVGGDDDSSTQWQDWLEDEDSDQAADFEARDELDARRVLLEAAMEDLNDRE
RDVLMMRRLQDPPVTLEELSEKYSVSRERIRQIEVRAFEKLQKRMTQLARDKGMLEMA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttacacgaaccttcccgctccttcacccgagcagggactttcccgttacctg
caagagatccgtaaattcccgatgctcgaacccgagcaggaatatatgctggcccgcaac
tgggtcgatcatggtgatacgcaagccgcgcataagctggtgacaagccatctgcgtttg
gccgccaagattgccatgggctatcgcggttatggcctgccgcaggccgaggtgatttcc
gaagcgaacgtcggcctgatgcaggctgtgaaacgctttgaccctgaaaagggcttccgt
cttgcgacctatgcgatgtggtggatccgtgcctcgatccaggaatatatcctgcgctcg
tggtcgttggtgaaactgggcaccacctcggcgcagaaaaagcttttcttcaatctgcgc
aaggccaaagcccgcatcggtgcattggaagagggcgatctgcgccccgaacatgtccag
cgcatcgcgcatgatctgggcgtgcccgaggaagaagtcgtcaacatgaaccgccgtctg
tcggggggtgatgcctcgctgaacgcgatggtggggggcgatgacgatagctcgacccaa
tggcaggactggcttgaggacgaggattccgaccaggccgccgatttcgaggcccgcgac
gagctggacgcccgccgcgtgctgctggaagctgcgatggaagatctgaatgatcgcgaa
cgcgatgtgctgatgatgcgccgtctgcaagatccgccggtgacgctggaagagctgtcc
gagaaatacagcgtcagccgcgagcggatccgccagatcgaggtccgcgcctttgaaaag
ctgcaaaagcgtatgacccaattggcccgcgacaagggcatgttggaaatggcctaa
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