Ketogulonicigenium vulgare WSH-001: KVU_0584
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Entry
KVU_0584 CDS
T01909
Name
(GenBank) Peptidoglycan binding domain protein, putative
KO
K21470
L,D-transpeptidase YcbB
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kvl01002
]
KVU_0584
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kvl01011
]
KVU_0584
Peptidases and inhibitors [BR:
kvl01002
]
Cysteine peptidases
Family C82
KVU_0584
Peptidoglycan biosynthesis and degradation proteins [BR:
kvl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KVU_0584
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEM40423
UniProt:
F9Y3Q9
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All DBs
Position
630659..632281
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AA seq
540 aa
AA seq
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MVQVQMSRRALLRGLSGGMVAGLLPAGGAMALGLDQAGFRQGLIEAIGDDATLRSFYGAR
DYQALWAGTEDTAVQRRNALLAAMADAPAHGLPASLFDPYDLLAKMHAAATPQAQGTAEA
ALSRAAVSLGQALHGGFLTPGRVISLIKRQAPQVDGVALLNAMTSQSAGAVLRALTPSDA
QYAGLMRARAQLDAAEAAGGWGGEVFAGAAGKLQLGDQGDAVLSLRNRLMLQGYMAPSLS
PVFDQSLLLGVQAFQTAHGLATDGVVGAGTLAELNMGIDARIQQVLVAMERARWSNKPLG
ARHIWVNLADYHTVIRNNGMDEFRTRSVIGARGADRETPEFSDIMNHMVVNPSWHVPRSI
VVGEYLPQLQRNPYAVSHINVQDGSGRAIDRSLIDFNAYNASNFPFSMREPPSRGNALGL
VKFMFPNQWNIYLHDTPSKDLFARETRAFSHGCIRLADPFDFAYQLLGPQTSDPRGLFQR
TLDTGRETRVDLEQPLPVHLDYRTTVIAPSGAVTFRRDIYGRDAAIWGAMAQQGVAARLV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggttcaaatgtcgcgtcgggcgctgctgcgcggtctatcgggtggaatggtg
gcgggcctgttgcctgcaggcggtgcgatggcgctggggcttgatcaggcaggctttcgt
cagggcctgatcgaggcgatcggcgatgacgcgaccctgcgcagcttttatggcgcgcgc
gattatcaggccttgtgggctggcaccgaagatactgccgtccaacgtcgcaacgcgctg
ctggctgcgatggcagacgcgcctgcgcatggtctgcccgcgtcgctgttcgatccctat
gatctgctggcgaaaatgcacgccgccgcaacaccgcaggcccaaggcaccgccgaggct
gcgctgagccgtgccgccgtctcattggggcaggcgctgcatggtggttttctgacaccg
ggtcgggtgatttcgctgatcaagcggcaggcaccgcaggtcgatggcgtcgcgctgttg
aacgcgatgaccagccaatctgcgggcgccgtgctgcgtgcgcttacgccgtcggatgcg
caatatgccggtctgatgcgcgcccgcgcgcagctggatgcggccgaggcggctggcggc
tggggcggcgaggtttttgccggtgccgccggtaaattgcagctgggcgatcagggcgat
gccgtgctgtccctgcgcaaccgactgatgttgcagggctatatggcgcccagcctcagc
cccgtctttgaccagagcctgcttttgggcgtgcaggcgttccagaccgcgcatggcctt
gccaccgatggcgtcgtcggggcgggaactttggccgaattgaacatggggatcgacgcc
cgtatccagcaggtgctggtcgcgatggagcgcgcgcgctggtcgaacaaacccttgggc
gcgcggcatatctgggtgaacctcgccgattaccatacggtgatccgcaacaatggtatg
gacgaattccgcacccgttcggtgatcggcgcgcgcggtgcagatcgcgaaacgcccgag
ttttccgatatcatgaaccatatggtggtgaaccccagctggcatgtgccacgctcgatc
gtcgtgggggaatatctgccgcaattgcagcgcaacccctatgccgttagccatatcaat
gtgcaggatgggtctggccgcgcgatcgaccgcagcttgatcgattttaacgcctataat
gccagcaacttcccgttttccatgcgcgagccgccctcgcgcgggaatgctttggggttg
gtgaaattcatgttcccgaaccagtggaacatctatctgcatgatacgccgtccaaggat
ctgttcgcgcgcgagacgcgggcctttagccacggctgcatccgcttggccgatcccttt
gatttcgcctatcaactgctggggccgcaaaccagcgatccgcgcggcctgttccagcgc
acgctggacaccggccgcgagacgcgcgtcgatctggaacagccgctgccggtgcatctg
gattaccgcaccacggttatcgcgccctcgggtgcggttacgttccgccgcgacatctat
ggccgcgacgcagcgatctggggtgcaatggcgcagcaaggggtagcggcgcggcttgtc
tga
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