Ketogulonicigenium vulgare WSH-001: KVU_1232
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Entry
KVU_1232 CDS
T01909
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KVU_1232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvl03021
]
KVU_1232
Transcription machinery [BR:
kvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KVU_1232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
FTCD_C
DUF1451
GDH_ACT3
AcMNPV_Ac75
Tudor_4
Motif
Other DBs
NCBI-ProteinID:
AEM41071
UniProt:
F9Y7E3
LinkDB
All DBs
Position
complement(1295845..1297821)
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AA seq
658 aa
AA seq
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MAVKDSDDVKDNEQDSDISFDMSQAAVKRMIADARERGYITYDQLNSVLPPDQVSSDQIE
DVMSMLSEMGIQVTDEEETEEVADDGTSREVATVGARELTLAGPEVEKTDRTDDPVRMYL
REMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFNAITIWRDELMDEAVLLRDVI
DLEATFGNQMGEDDDAPVVDAAGGSEPKMRERGAELDADGNPISRDDDDEDDDQNSMSLA
AMEATLRPRVLEALDTIAEQAMALEELQEARMRAKMEEGADFSVAEEGQYQVLRQKIVEV
VNSLHLHSNRIDALIDQLYGINRRIMSIDSSMVKLADQARINRKEFIDEYRGSELDPSWL
ERMGQKPGRGWAMLIERSREKVEELRAEMAQVGQYVGVDINEFRRIVQQVQKGEKEARQA
KKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
RQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAEKLQMPLEKVR
KVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAILPLDSAIQENLKETTTRVLASLTPRE
ERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaagactctgacgacgtcaaagacaacgaacaggacagcgatatctcgttt
gatatgtcgcaagctgccgtcaaacggatgatcgctgacgcgcgtgagcgtggctatatc
acctatgaccagttgaattccgtcctgccgcccgatcaggtctcgtccgaccagatcgag
gatgtgatgtcgatgctgtcggagatgggcattcaggtcaccgacgaggaggagaccgag
gaagtcgccgatgacggcacctcgcgcgaggttgcgaccgttggcgcccgcgagctgacc
cttgccggccctgaggtcgaaaaaaccgaccgtaccgatgaccctgtgcggatgtatctg
cgcgagatgggctcggtcgaattgctgtcgcgcgaaggcgagatcgcgatcgccaagcgg
atcgaggctggccgcaatacgatgatcgcgggcctgtgcgaaagcccgctgacctttaac
gcgatcaccatctggcgcgacgagctgatggacgaggccgtgctgctgcgcgatgtcatc
gacctcgaggcgacctttggcaatcaaatgggcgaggatgacgatgcgcccgtggttgat
gccgcaggtggcagcgagccgaaaatgcgcgagcgcggcgccgagctggatgccgatggc
aatcccatcagccgcgatgacgatgatgaggatgatgaccagaacagcatgagccttgcg
gccatggaagcgaccttgcgtccgcgtgttctggaagcccttgataccattgctgaacag
gcgatggcattggaagagctgcaagaggcgcggatgcgcgccaagatggaagagggggcc
gatttttcggtcgccgaggaaggccagtatcaggttctgcgccaaaagatcgtcgaggtc
gtgaactcgctgcatctgcacagcaaccggatcgacgcgctgatcgaccagctttacggc
atcaaccgccgtatcatgtcgatcgacagttcgatggtgaaactggcggaccaggcgcgg
atcaaccgcaaggaattcatcgacgaatatcgcggctcggaacttgatccgtcctggcta
gagcgtatgggccaaaagcccggtcgcggctgggccatgctgatcgagcgttcgcgcgaa
aaggtcgaggaattgcgcgctgaaatggcgcaggtcggccaatatgtcggcgtcgatatc
aacgaattccgccgcatcgtgcagcaggttcaaaagggcgagaaagaagcccgtcaggcc
aaaaaagaaatggtcgaggcgaacctgcgtctggtgatctcgatcgccaagaaatacacg
aaccgcggtttgcaattccttgatcttattcaggaaggcaatatcggcctaatgaaggcc
gtcgataagttcgaataccgtcgcggctataaattctcgacctatgcgacatggtggatc
cgtcaggcgatcacgcgttcgatcgccgatcaggcgcgcaccatccgtatcccggtgcat
atgatcgagacgatcaataaactggtccgcaccagccgtcagatgctgcatgaaatcggc
cgcgagccgacgcccgaagagctggcggaaaagctgcagatgccgctggaaaaagtccgc
aaggtgatgaagatcgccaaagagccgatcagcctcgaaaccccgatcggggacgaggaa
gacagccagctgggcgatttcatcgaggacaagaacgcgatcctgccgctggattccgcc
attcaggagaacctgaaggaaaccacgacccgcgttctggccagcctgaccccgcgcgag
gaacgcgttctgcggatgcgttttggcatcggcatgaacaccgaccacacgttggaagag
gtcggccagcagttcagcgtgacgcgcgaacgtatccgccagatcgaggcaaaggcgctg
cgcaagttgaaacaccccagccgctcgcgcaagctgcgcagcttcttggatcaataa
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