KEGG   Ketogulonicigenium vulgare WSH-001: KVU_1232
Entry
KVU_1232          CDS       T01909                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
kvl  Ketogulonicigenium vulgare WSH-001
Pathway
kvl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:kvl00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KVU_1232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kvl03021]
    KVU_1232
Transcription machinery [BR:kvl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KVU_1232
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r3 Sigma70_r2 Sigma70_r1_1 Sigma70_r4 Sigma70_r1_2 FTCD_C DUF1451 GDH_ACT3 AcMNPV_Ac75 Tudor_4
Other DBs
NCBI-ProteinID: AEM41071
UniProt: F9Y7E3
LinkDB
Position
complement(1295845..1297821)
AA seq 658 aa
MAVKDSDDVKDNEQDSDISFDMSQAAVKRMIADARERGYITYDQLNSVLPPDQVSSDQIE
DVMSMLSEMGIQVTDEEETEEVADDGTSREVATVGARELTLAGPEVEKTDRTDDPVRMYL
REMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFNAITIWRDELMDEAVLLRDVI
DLEATFGNQMGEDDDAPVVDAAGGSEPKMRERGAELDADGNPISRDDDDEDDDQNSMSLA
AMEATLRPRVLEALDTIAEQAMALEELQEARMRAKMEEGADFSVAEEGQYQVLRQKIVEV
VNSLHLHSNRIDALIDQLYGINRRIMSIDSSMVKLADQARINRKEFIDEYRGSELDPSWL
ERMGQKPGRGWAMLIERSREKVEELRAEMAQVGQYVGVDINEFRRIVQQVQKGEKEARQA
KKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWI
RQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAEKLQMPLEKVR
KVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAILPLDSAIQENLKETTTRVLASLTPRE
ERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggctgtgaaagactctgacgacgtcaaagacaacgaacaggacagcgatatctcgttt
gatatgtcgcaagctgccgtcaaacggatgatcgctgacgcgcgtgagcgtggctatatc
acctatgaccagttgaattccgtcctgccgcccgatcaggtctcgtccgaccagatcgag
gatgtgatgtcgatgctgtcggagatgggcattcaggtcaccgacgaggaggagaccgag
gaagtcgccgatgacggcacctcgcgcgaggttgcgaccgttggcgcccgcgagctgacc
cttgccggccctgaggtcgaaaaaaccgaccgtaccgatgaccctgtgcggatgtatctg
cgcgagatgggctcggtcgaattgctgtcgcgcgaaggcgagatcgcgatcgccaagcgg
atcgaggctggccgcaatacgatgatcgcgggcctgtgcgaaagcccgctgacctttaac
gcgatcaccatctggcgcgacgagctgatggacgaggccgtgctgctgcgcgatgtcatc
gacctcgaggcgacctttggcaatcaaatgggcgaggatgacgatgcgcccgtggttgat
gccgcaggtggcagcgagccgaaaatgcgcgagcgcggcgccgagctggatgccgatggc
aatcccatcagccgcgatgacgatgatgaggatgatgaccagaacagcatgagccttgcg
gccatggaagcgaccttgcgtccgcgtgttctggaagcccttgataccattgctgaacag
gcgatggcattggaagagctgcaagaggcgcggatgcgcgccaagatggaagagggggcc
gatttttcggtcgccgaggaaggccagtatcaggttctgcgccaaaagatcgtcgaggtc
gtgaactcgctgcatctgcacagcaaccggatcgacgcgctgatcgaccagctttacggc
atcaaccgccgtatcatgtcgatcgacagttcgatggtgaaactggcggaccaggcgcgg
atcaaccgcaaggaattcatcgacgaatatcgcggctcggaacttgatccgtcctggcta
gagcgtatgggccaaaagcccggtcgcggctgggccatgctgatcgagcgttcgcgcgaa
aaggtcgaggaattgcgcgctgaaatggcgcaggtcggccaatatgtcggcgtcgatatc
aacgaattccgccgcatcgtgcagcaggttcaaaagggcgagaaagaagcccgtcaggcc
aaaaaagaaatggtcgaggcgaacctgcgtctggtgatctcgatcgccaagaaatacacg
aaccgcggtttgcaattccttgatcttattcaggaaggcaatatcggcctaatgaaggcc
gtcgataagttcgaataccgtcgcggctataaattctcgacctatgcgacatggtggatc
cgtcaggcgatcacgcgttcgatcgccgatcaggcgcgcaccatccgtatcccggtgcat
atgatcgagacgatcaataaactggtccgcaccagccgtcagatgctgcatgaaatcggc
cgcgagccgacgcccgaagagctggcggaaaagctgcagatgccgctggaaaaagtccgc
aaggtgatgaagatcgccaaagagccgatcagcctcgaaaccccgatcggggacgaggaa
gacagccagctgggcgatttcatcgaggacaagaacgcgatcctgccgctggattccgcc
attcaggagaacctgaaggaaaccacgacccgcgttctggccagcctgaccccgcgcgag
gaacgcgttctgcggatgcgttttggcatcggcatgaacaccgaccacacgttggaagag
gtcggccagcagttcagcgtgacgcgcgaacgtatccgccagatcgaggcaaaggcgctg
cgcaagttgaaacaccccagccgctcgcgcaagctgcgcagcttcttggatcaataa

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