Ketogulonicigenium vulgare WSH-001: KVU_1475
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Entry
KVU_1475 CDS
T01909
Name
(GenBank) DNA helicase II, putative
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03420
Nucleotide excision repair
kvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KVU_1475
03430 Mismatch repair
KVU_1475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_1475
Enzymes [BR:
kvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KVU_1475
DNA repair and recombination proteins [BR:
kvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KVU_1475
MMR (mismatch excision repair)
Other MMR factors
KVU_1475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEM41314
UniProt:
F9Y997
LinkDB
All DBs
Position
complement(1587016..1589394)
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AA seq
792 aa
AA seq
DB search
MGLSSHGALGYGAAMTENSPNISLSQRAMGVRPSPYLEGLNPAQRAAVETLDGPVLMLAG
AGTGKTRALTARIVHILNTQRAYPRQILAVTFTNKAAREMRLRINAMLGDQAEGMAWLGT
FHSVCVKLLRRHAELVGLRPDFTILDSDDQLRLMKQLIIAANIDEKRWPARALANVIDGW
KNKAIAPDSIPTSDASFYDGRAMRLYAEYQERLRQLNAVDFGDLLMHMVRIFQKYPDVLQ
KYQQDFKYILVDEYQDTNVAQYLWLRLLAGGHSNICCVGDDDQSIYGWRGAEVGNILRFE
RDFPGATVIRLEQNYRSTGHILAAASGVIAKNGGRLGKTLWTQSYMGEKVRLIGHWDNEE
EARWVGEEIEALQRGTRGIGPFELDDMAILVRASHQMRGFEDRFLAIGLPYRVIGGPRFY
ERLEIRDAMAYFRLAVSSTDDLAFERIVNTPKRGLGEKAVQTIQRTARERGMSLLDAAGV
VVEQRLLGGKALASLGGLVQQFYRWHDAVLAGRSHIEIAEEILDGSGYTTMWQNEKTPDA
EGRLENLKELVKSLDNFENMQGFLEHVSLVAENESDDSQPQISIMTLHAAKGLEFPVVFL
PGWEDGIFPSQRSLDESGLAALEEERRLAYVGITRAERVAIISFAATRFFHGQRQSMLPS
RFIDELPHDDVEVLTPPTLNNGHYGAASSSPAQVEERAAKADVYNSPGWQRMQSRSVQRG
AGGMKSARNVVIDAVASPVFELGQRVFHQKFGYGAVTALDAGKVMVAFDKAGEKHLMAHF
LVPAAQADDIPF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggggctttccagccatggcgcgcttggatatggtgcagccatgaccgagaatagcccc
aatatcagcctttcgcagcgcgccatgggcgtgcgcccctcgccctatcttgaggggctg
aaccccgcgcagcgcgcggcggtcgagacattggacgggccggtgctgatgctggcgggg
gcgggaacgggcaaaacgcgggcgctgacggcgcggatcgtgcatatcctgaacacgcag
cgcgcctatccgcgccaaattctggcggtgacctttaccaataaagccgcgcgcgagatg
cggttgcgcatcaatgcgatgctgggcgatcaggccgaagggatggcgtggctgggcacc
ttccactcggtctgtgtcaagctgctgcgccgccatgcggaactggtcggcctgcgcccc
gatttcacgattctggattcggatgatcaattgcgcctgatgaagcagttgatcatcgcc
gccaatattgacgaaaaacgctggcccgcgcgggctttggccaatgtcatcgacggctgg
aagaacaaggcgatcgcgcctgatagcattccgacctcggatgccagcttttatgacggg
cgcgcgatgcggctatacgccgaatatcaggaacgcctgcgccaattgaacgcggtcgat
tttggcgacctgctgatgcatatggtgcgcattttccaaaagtatcccgatgtgctgcag
aaataccagcaggatttcaaatacatcctcgtcgacgaataccaagataccaatgtggcg
caatatctgtggctgcgcctgctcgcgggcgggcatagcaatatctgctgcgtcggcgat
gatgaccagtcgatctatggctggcgcggcgccgaggtgggcaatattttgcggtttgaa
cgcgacttccccggcgcgacggtgatccggctggagcagaactaccgctcgaccggacat
attctggcggcagcctcgggcgtgattgccaagaacggcgggcggctgggcaagacgctg
tggacgcagtcctatatgggcgaaaaggtccgtctgatcggccactgggataacgaggaa
gaggcgcgctgggtcggcgaagagatcgaggccctgcaacgcggcacgcgcggcattggc
ccgttcgaactggatgatatggcgattttggtgcgcgcgtcgcaccaaatgcgcgggttc
gaggatcgctttttggcgattggtctgccctatcgcgtcatcggcggcccgcgtttctat
gaacggctcgagattcgcgatgcgatggcctatttccggctggcggtctcatccaccgac
gatctggcgttcgagcggatcgtgaatacgcccaagcgcggccttggagaaaaggcggtg
cagaccatccaacgcaccgcgcgcgagcgtggcatgtcgctgttggatgcggcgggggtt
gtggtggaacagcgcctgctgggcggtaaggcccttgcctcgctgggcgggctcgtgcag
cagttctaccgctggcatgatgccgtactggcgggccggtcgcatatcgagattgcggaa
gagatcctcgacggttctggctacacgactatgtggcagaacgagaagacccccgacgcc
gaggggcggctggagaacctgaaagaattggtcaagtcgctggataatttcgagaatatg
caaggtttccttgagcatgtctcgctggtggcggaaaacgaatcggacgatagccagccg
caaatctcgatcatgacgctgcatgcggccaaggggctggagtttcccgtcgtcttcctg
ccggggtgggaggacgggattttcccctcgcaaagatcgctggacgaaagcgggcttgcc
gcgctcgaggaggaacgccgtctggcctatgtcggcatcacacgcgccgagcgggtggcg
atcatcagtttcgccgcgacgcggttcttccatgggcaacggcagtcgatgctgccctcg
cgctttatcgacgagttgccgcatgatgatgtcgaggtgctgacaccgccaacgctgaac
aacggccattacggagccgccagttctagccccgcgcaggtcgaggaacgtgccgcaaag
gccgatgtctataattcccccggctggcagcggatgcagtcacgcagcgttcagcgcggc
gcgggcgggatgaaatccgcccgtaatgtggtgattgatgcggtggccagcccggtgttc
gaactgggccagcgcgtgttccaccaaaagttcggctatggtgcggtcacggcgctggat
gcgggcaaggtgatggtggcctttgacaaggcgggggaaaagcacctgatggcgcatttc
ctggtccccgctgcacaggctgacgacatcccgttctga
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